Parental gene:

RPS28, ENSLAFG00000029923

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_114:2431969..2432580(+)


>ENSLAFG00000029923
ATGGACACCAGCCGTGTGCAGCCCATTAAGCTGGCCAGAGTCACCAAGGTGCTGGGCAGGACCGGCTCGCAGGGACAGTG
CACGCAGGTGCGCGTGGAATTCATGGACGACACGAGCCGCTCCATCATCCGCAACGTGAAAGGCCCCGTGCGTGAGGGCG
ACGTACTCACTCTGTTGGAGTCAGAGCGAGAGGCTCGGAGGCTTCGT

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004917 ortholog_one2one 1 retrogene
retro_amel_1359,
Bos taurus ENSBTAG00000002468 ortholog_one2one 1 retrogene
retro_btau_1130,
Cavia porcellus ENSCPOG00000022876 ortholog_one2one 5 retrogenes
retro_cpor_1092, retro_cpor_1485, retro_cpor_1504, retro_cpor_176, retro_cpor_702,
Equus caballus ENSECAG00000017256 ortholog_one2one 1 retrogene
retro_ecab_725,
Felis catus ENSFCAG00000024931 ortholog_one2one 3 retrogenes
retro_fcat_1130, retro_fcat_611, retro_fcat_752,
Homo sapiens ENSG00000233927 ortholog_one2one 9 retrogenes
retro_hsap_1192, retro_hsap_1352, retro_hsap_1725, retro_hsap_2220, retro_hsap_2279, retro_hsap_3748, retro_hsap_505, retro_hsap_523, retro_hsap_799,
Myotis lucifugus ENSMLUG00000023621 ortholog_one2one 1 retrogene
retro_mluc_2040,
Macaca mulatta ENSMMUG00000028895 ortholog_one2many 3 retrogenes
retro_mmul_122, retro_mmul_182, retro_mmul_807,
Monodelphis domestica ENSMODG00000003890 possible_ortholog 1 retrogene
retro_mdom_291,
Mus musculus ENSMUSG00000067288 ortholog_one2many 3 retrogenes
retro_mmus_2949, retro_mmus_3283, retro_mmus_91,
Oryctolagus cuniculus ENSOCUG00000021484 ortholog_one2one 2 retrogenes
retro_ocun_1230, retro_ocun_1799,
Pan troglodytes ENSPTRG00000040141 ortholog_one2one 6 retrogenes
retro_ptro_1228, retro_ptro_1613, retro_ptro_3037, retro_ptro_378, retro_ptro_391, retro_ptro_927,
Rattus norvegicus ENSRNOG00000042886 ortholog_one2many 2 retrogenes
retro_rnor_95, retro_rnor_96,
Sus scrofa ENSSSCG00000013597 ortholog_one2one 3 retrogenes
retro_sscr_132, retro_sscr_191, retro_sscr_808,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_168 69.35 88.41
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2. retro_lafr_755 53.57 81.16
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Download FASTA sequences of all ENSLAFG00000029923 retrocopies