Parental gene:

Rps28, ENSRNOG00000042886

Aliases:None
Description:40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:P62859]
Organism:Rat (Rattus norvegicus)
Coordinates:7:18859670..18861040(-)


>ENSRNOG00000042886
ATGGACACGAGTCGCGTGCAGCCCATCAAGCTGGCTAGGGTAACTAAAGTGCTGGGCAGGACCGGATCGCAGGGACAGTG
CACGCAGGTGCGAGTGGAATTTATGGATGACACCAGCCGCTCTATCATCCGAAACGTCAAAGGCCCTGTTCGAGAGGGTG
ATGTGCTCACCCTGTTGGAGTCAGAAAGAGAAGCTCGGAGGTTGCGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 18 .33 RPM
SRP017611_kidney 37 .61 RPM
SRP017611_liver 25 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004917 possible_ortholog 1 retrogene
retro_amel_1359,
Bos taurus ENSBTAG00000002468 possible_ortholog 1 retrogene
retro_btau_1130,
Cavia porcellus ENSCPOG00000022876 possible_ortholog 5 retrogenes
retro_cpor_1092, retro_cpor_1485, retro_cpor_1504, retro_cpor_176, retro_cpor_702,
Equus caballus ENSECAG00000017256 possible_ortholog 1 retrogene
retro_ecab_725,
Felis catus ENSFCAG00000024931 possible_ortholog 3 retrogenes
retro_fcat_1130, retro_fcat_611, retro_fcat_752,
Homo sapiens ENSG00000233927 ortholog_one2one 9 retrogenes
retro_hsap_1192, retro_hsap_1352, retro_hsap_1725, retro_hsap_2220, retro_hsap_2279, retro_hsap_3748, retro_hsap_505, retro_hsap_523, retro_hsap_799,
Loxodonta africana ENSLAFG00000029923 ortholog_one2many 2 retrogenes
retro_lafr_168, retro_lafr_755,
Myotis lucifugus ENSMLUG00000023621 possible_ortholog 1 retrogene
retro_mluc_2040,
Macaca mulatta ENSMMUG00000028895 possible_ortholog 3 retrogenes
retro_mmul_122, retro_mmul_182, retro_mmul_807,
Monodelphis domestica ENSMODG00000003890 possible_ortholog 1 retrogene
retro_mdom_291,
Mus musculus ENSMUSG00000067288 possible_ortholog 3 retrogenes
retro_mmus_2949, retro_mmus_3283, retro_mmus_91,
Oryctolagus cuniculus ENSOCUG00000021484 possible_ortholog 2 retrogenes
retro_ocun_1230, retro_ocun_1799,
Pan troglodytes ENSPTRG00000040141 ortholog_one2one 6 retrogenes
retro_ptro_1228, retro_ptro_1613, retro_ptro_3037, retro_ptro_378, retro_ptro_391, retro_ptro_927,
Sus scrofa ENSSSCG00000013597 possible_ortholog 3 retrogenes
retro_sscr_132, retro_sscr_191, retro_sscr_808,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_95 100.00 100.00
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2. retro_rnor_96 95.65 100.00
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Download FASTA sequences of all ENSRNOG00000042886 retrocopies