Parental gene: | PA2G4, ENSMMUG00000002164 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 11:53160974..53170416(+) |
>ENSMMUG00000002164
ATGTCGGGCGAGGACGAGCAGCAGGAGCAAACTATCGCCGAGGACCTGGTCGTGACCAAGTATAAGATGGGGGGCGACAT
CGCCAACAGGGTACTTCGGTCCTTGGTGGAAGCATCTAGCTCGGGTGTGTCAGTACTGAGCCTGTGTGAGAAAGGTGATG
CCATGATTATGGAAGAAACAGGGAAAATCTTCAAGAAAGAAAAGGAAATGAAGAAAGGTATTGCTTTTCCCACCAGCATT
TCGGTAAATAACTGTGTATGTCACTTCTCCCCTTTGAAGAGCGACCAGGATTATATTCTCAAGGAAGGTGACTTGGTAAA
AATTGACCTTGGGGTCCATGTGGATGGCTTCATCGCTAATGTAGCACATACTTTTGTGGTTGGTGTAGCTCAGGGGACCC
AAGTAACAGGGAGGAAAGCAGATGTTATTAAGGCAGCTCACCTTTGTGCTGAAGCTGCCCTACGCCTGGTCAAACCTGGA
AATCAGAACACACAAGTGACAGAAGCCTGGAACAAAGTTGCCCACTCATTTAACTGCACGCCAATAGAAGGTATGCTGTC
ACACCAGTTGAAGCAGCATGTCATCGATGGAGAAAAAACCATTATCCAGAATCCCACAGACCAGCAGAAGAAGGACCATG
AAAAAGCTGAATTTGAGGTACATGAAGTATATGCTGTGGATGTTCTCGTCAGCTCAGGAGAGGGCAAGGCCAAGGATGCA
GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACAGTATGGACTGAAAATGAAAACTTCACGTGCCTTCTTCAG
TGAGGTGGAAAGGCGTTTTGATGCCATGCCGTTTACTTTAAGAGCATTTGAAGATGAGAAGAAGGCTCGGATGGGTGTGG
TGGAGTGCGCCAAACATGAACTGCTGCAACCATTTAATGTTCTCTATGAGAAGGAGGGTGAATTTGTTGCCCAGTTTAAA
TTTACAGTTCTGCTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTTGAACCTGACCTCTACAAGTCTGAGAT
GGAGGTCCAGGATGCAGAGCTAAAGGCCCTCCTCCAGAGTTCTGCAAGTCGAAAAACCCAGAAAAAGAAAAAAAAGAAGG
CCTCCAAGACTGCAGAGAATGCCACCAGTGGGGAAACATTAGAAGAAAATGAAGCTGGGGACTGA
ATGTCGGGCGAGGACGAGCAGCAGGAGCAAACTATCGCCGAGGACCTGGTCGTGACCAAGTATAAGATGGGGGGCGACAT
CGCCAACAGGGTACTTCGGTCCTTGGTGGAAGCATCTAGCTCGGGTGTGTCAGTACTGAGCCTGTGTGAGAAAGGTGATG
CCATGATTATGGAAGAAACAGGGAAAATCTTCAAGAAAGAAAAGGAAATGAAGAAAGGTATTGCTTTTCCCACCAGCATT
TCGGTAAATAACTGTGTATGTCACTTCTCCCCTTTGAAGAGCGACCAGGATTATATTCTCAAGGAAGGTGACTTGGTAAA
AATTGACCTTGGGGTCCATGTGGATGGCTTCATCGCTAATGTAGCACATACTTTTGTGGTTGGTGTAGCTCAGGGGACCC
AAGTAACAGGGAGGAAAGCAGATGTTATTAAGGCAGCTCACCTTTGTGCTGAAGCTGCCCTACGCCTGGTCAAACCTGGA
AATCAGAACACACAAGTGACAGAAGCCTGGAACAAAGTTGCCCACTCATTTAACTGCACGCCAATAGAAGGTATGCTGTC
ACACCAGTTGAAGCAGCATGTCATCGATGGAGAAAAAACCATTATCCAGAATCCCACAGACCAGCAGAAGAAGGACCATG
AAAAAGCTGAATTTGAGGTACATGAAGTATATGCTGTGGATGTTCTCGTCAGCTCAGGAGAGGGCAAGGCCAAGGATGCA
GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACAGTATGGACTGAAAATGAAAACTTCACGTGCCTTCTTCAG
TGAGGTGGAAAGGCGTTTTGATGCCATGCCGTTTACTTTAAGAGCATTTGAAGATGAGAAGAAGGCTCGGATGGGTGTGG
TGGAGTGCGCCAAACATGAACTGCTGCAACCATTTAATGTTCTCTATGAGAAGGAGGGTGAATTTGTTGCCCAGTTTAAA
TTTACAGTTCTGCTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTTGAACCTGACCTCTACAAGTCTGAGAT
GGAGGTCCAGGATGCAGAGCTAAAGGCCCTCCTCCAGAGTTCTGCAAGTCGAAAAACCCAGAAAAAGAAAAAAAAGAAGG
CCTCCAAGACTGCAGAGAATGCCACCAGTGGGGAAACATTAGAAGAAAATGAAGCTGGGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 56 .80 RPM |
| SRP007412_brain | 65 .44 RPM |
| SRP007412_cerebellum | 57 .67 RPM |
| SRP007412_heart | 59 .95 RPM |
| SRP007412_kidney | 54 .22 RPM |
| SRP007412_liver | 35 .70 RPM |
| SRP007412_testis | 155 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007181 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000170515 | possible_ortholog | 6 retrogenes | |
| Mus musculus | ENSMUSG00000025364 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017544 | possible_ortholog | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017342 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025851 | possible_ortholog | 7 retrogenes | |
| Sus scrofa | ENSSSCG00000000377 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022666 | possible_ortholog | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006777 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000009523 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1168 | 88.81 | 74.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2631 | 81.92 | 92.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000002164 retrocopies