Parental gene: | PA2G4, ENSPPYG00000025851 |
| Aliases: | None |
| Description: | proliferation-associated protein 2G4 [Source:RefSeq peptide;Acc:NP_001124717] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:55862466..55871934(+) |
>ENSPPYG00000025851
ATGTCGGGCGAGGACGAGCAGCAGGAGCAAACTATCGCTGAGGACCTGGTCGTGACCAAGTATAAGATGGGGGGCGACAT
CGCCAACAGGGTACTTCGGTCCTTGGTGGAAGCATCTAGCTCAGGTGTGTCGGTGTTGAGCCTGTGTGAGAAAGGTGATG
CCATGATTATGGAAGAAACAGGGAAAATCTTCAAGAAAGAAAAGGAAATGAAGAAAGGTATTGCTTTTCCCACCAGCATT
TCGGTAAATAACTGTGTATGTCACTTCTCCCCTTTGAAGAGCGACCAGGATTATATTCTCAAGGAAGGTGACTTGGTAAA
AATTGACCTTGGGGTCCATGTGGATGGCTTCATTGCTAATGTAGCTCATACTTTTGTGGTTGATGTAGCTCAGGGGACCC
AAGTAACAGGGAGGAAAGCAGATGTTATTAAGGCAGCTCACCTTTGTGCTGAAGCTGCCCTACGCCTGGTCAAACCTGGA
AATCAGAACACACAAGTGACAGAAGCCTGGAACAAAGTCGCCCACTCATTTAACTGCACGCCAATAGAAGGTATGTTGTC
ACACCAGTTGAAGCAGCATGTCATCGATGGAGAAAAAACCATTATCCAGAATCCCACAGACCAGCAGAAGAAGGACCATG
AAAAAGCTGAATTTGAGGTACATGAAGTATATGCTGTGGATGTTCTCGTCAGCTCAGGAGAGGGCAAGGCCAAGGATGCA
GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACAGTATGGACTGAAAATGAAAACTTCACGTGCCTTCTTCAG
TGAGGTGGAAAGGCGTTTTGATGCCATGCCGTTTACTTTAAGAGCATTTGAAGATGAGAAGAAGGCTCGGATGGGTGTGG
TGGAGTGCGCCAAACATGAACTGCTGCAACCATTTAATGTTCTCTATGAGAAGGAGGGTGAATTTGTTGCCCAGTTTAAA
TTTACAGTTCTGCTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTCGAGCCTGACCTCTACAAGTCTGAGAT
GGAGGTCCAGGATGCAGAGCTAAAGGCCCTCCTCCAGAGTTCTGCAAGTCGAAAAACCCAGAAAAAGAAAAAAAAGAAGG
CCTCCAAGACTGCAGAGAATGCCACCAGTGGGGAAACATTAGAAGAAAATGAAGCTGGGGACTGA
ATGTCGGGCGAGGACGAGCAGCAGGAGCAAACTATCGCTGAGGACCTGGTCGTGACCAAGTATAAGATGGGGGGCGACAT
CGCCAACAGGGTACTTCGGTCCTTGGTGGAAGCATCTAGCTCAGGTGTGTCGGTGTTGAGCCTGTGTGAGAAAGGTGATG
CCATGATTATGGAAGAAACAGGGAAAATCTTCAAGAAAGAAAAGGAAATGAAGAAAGGTATTGCTTTTCCCACCAGCATT
TCGGTAAATAACTGTGTATGTCACTTCTCCCCTTTGAAGAGCGACCAGGATTATATTCTCAAGGAAGGTGACTTGGTAAA
AATTGACCTTGGGGTCCATGTGGATGGCTTCATTGCTAATGTAGCTCATACTTTTGTGGTTGATGTAGCTCAGGGGACCC
AAGTAACAGGGAGGAAAGCAGATGTTATTAAGGCAGCTCACCTTTGTGCTGAAGCTGCCCTACGCCTGGTCAAACCTGGA
AATCAGAACACACAAGTGACAGAAGCCTGGAACAAAGTCGCCCACTCATTTAACTGCACGCCAATAGAAGGTATGTTGTC
ACACCAGTTGAAGCAGCATGTCATCGATGGAGAAAAAACCATTATCCAGAATCCCACAGACCAGCAGAAGAAGGACCATG
AAAAAGCTGAATTTGAGGTACATGAAGTATATGCTGTGGATGTTCTCGTCAGCTCAGGAGAGGGCAAGGCCAAGGATGCA
GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACAGTATGGACTGAAAATGAAAACTTCACGTGCCTTCTTCAG
TGAGGTGGAAAGGCGTTTTGATGCCATGCCGTTTACTTTAAGAGCATTTGAAGATGAGAAGAAGGCTCGGATGGGTGTGG
TGGAGTGCGCCAAACATGAACTGCTGCAACCATTTAATGTTCTCTATGAGAAGGAGGGTGAATTTGTTGCCCAGTTTAAA
TTTACAGTTCTGCTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTCGAGCCTGACCTCTACAAGTCTGAGAT
GGAGGTCCAGGATGCAGAGCTAAAGGCCCTCCTCCAGAGTTCTGCAAGTCGAAAAACCCAGAAAAAGAAAAAAAAGAAGG
CCTCCAAGACTGCAGAGAATGCCACCAGTGGGGAAACATTAGAAGAAAATGAAGCTGGGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 51 .81 RPM |
| SRP007412_cerebellum | 46 .69 RPM |
| SRP007412_heart | 25 .62 RPM |
| SRP007412_kidney | 40 .41 RPM |
| SRP007412_liver | 34 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007181 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000170515 | ortholog_one2one | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000002164 | possible_ortholog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017544 | ortholog_one2one | 6 retrogenes | |
| Sus scrofa | ENSSSCG00000000377 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022666 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000009523 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1595 | 79.20 | 63.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1778 | 89.24 | 87.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2375 | 95.33 | 92.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2869 | 97.21 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2993 | 87.88 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_3430 | 88.77 | 92.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_3807 | 88.77 | 92.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000025851 retrocopies