Parental gene:

MMU.10035, ENSMMUG00000012575

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein Q [Source:RefSeq peptide;Acc:NP_001180774]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:81650160..81681785(-)


>ENSMMUG00000012575
ATGGCTACAGAACATGTTAATGGAAATGGTACTGAAGAGCCCATGGATACTACTTCTGCAGTTATCCATTCAGAAAATTT
TCAGACATTGCTTGATGCTGGTTTACCACAGAAAGTTGCTGAAAAACTAGATGAAATTTACGTTGCAGGGCTAGTTGCAC
ATAGTGATTTAGATGAAAGAGCTATTGAAGCTTTAAAAGAATTCAATGAAGACGGTGCATTGGCAGTTCTTCAACAGTTT
AAAGACAGTGATCTCTCTCATGTTCAGAACAAAAGTGCCTTTTTATGTGGAGTCATGAAGACTTATAGGCAGAGAGAAAA
ACAAGGGACCAAAGTAGCAGACTCTAGTAAAGGACCAGATGAGGCAAAAATTAAGGCACTCTTGGAAAGAACAGGCTACA
CACTTGATGTGACCACTGGACAGAGGAAGTATGGGGGACCACCTCCAGATTCCGTTTATTCAGGTCAGCAGCCTTCTGTT
GGCACTGAGATATTTGTGGGAAAGATCCCAAGAGATCTATTTGAGGATGAACTTGTTCCTTTATTTGAGAAAGCTGGACC
TATATGGGATCTTCGTCTAATGATGGATCCACTCACTGGTCTCAATAGAGGTTATGCGTTTGTCACTTTCTGTACAAAAG
AAGCAGCTCAGGAGGCTGTTAAACTGTATAATAATCATGAAATTCGTTCTGGAAAACACATTGGTGTCTGCATCTCGGTT
GCCAACAATAGGCTTTTTGTGGGCTCTATTCCTAAGAGTAAAACCAAGGAACAGATTCTTGAAGAATTTAGCAAAGTAAC
AGAGGGTCTTACAGACGTCATTTTATACCACCAACCGGATGACAAGAAAAAAAACAGAGGCTTTTGCTTTCTTGAATATG
AAGATCACAAAACAGCTGCCCAGGCAAGGCGTAGGTTAATGAGTGGTAAAGTCAAGGTCTGGGGGAATGTTGGAACTGTT
GAATGGGCTGATCCTATAGAAGATCCTGATCCTGAGGTTATGGCAAAGGTAAAAGTGCTGTTTGTACGCAACCTTGCCAA
TACTGTAACAGAAGAGATTTTAGAAAAGGCATTTAGTCAGTTTGGGAAACTGGAACGAGTGAAGAAGTTAAAAGATTATG
CATTCATTCATTTTGATGAACGAGATGGTGCTGTCAAGGCTATGGAAGAAATGAATGGCAAAGACTTGGAGGGAGAAAAT
ATTGAAATTGTTTTTGCCAAGCCACCAGATCAGAAAAGGAAAGAAAGAAAAGCTCAGAGGCAAGCAGCAAAAAATCAAAT
GTATGACGATTACTACTATTATGGTCCACCTCATATGCCCCCTCCAACAAGAGGTCGAGGGCGTGGAGGTAGAGGTGGTT
ATGGATATCCTCCAGATTATTATGGATATGAAGATTATTATGATTATTATGGCTATGATTACCATAACTATCGTGGTGGA
TATGAAGATCCATACTATGGTTATGAAGATTTTCAAGTTGGAGCTAGAGGAAGGGGTGGTAGAGGAGCAAGGGGTGCTGC
TCCATCCAGAGGTCGTGGGGCTGCTCCTCCCCGCGGTAGAGCCGGTTATTCACAGAGAGGAGGTCCTGGATCAGCAAGAG
GCGTTCGAGGTGCGAGAGGAGGTGCCCAACAACAAAGAGGCCGCGGGGTACGTGGTGCGAGGGGTGGCCGCGGTGGAAAT
GTAGGAGGAAAGCGCAAAGCTGATGGGTACAACCAGCCAGATTCCAAGCGGCGCCAGACCAATAATCAGAACTGGGGCTC
CCAACCCATTGCTCAGCAACCGCTCCAAGGTGGTGATCATTCTGGTAACTATGGTTACAAATCTGAAAACCAGGAGTTTT
ATCAGGATACTTTTGGGCAACAGTGGAAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 23 .75 RPM
SRP007412_brain_prefrontal_cortex 31 .10 RPM
SRP007412_cerebellum 24 .15 RPM
SRP007412_heart 30 .27 RPM
SRP007412_kidney 31 .34 RPM
SRP007412_liver 17 .22 RPM
SRP007412_testis 33 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000018345 ortholog_one2one 1 retrogene
retro_dnov_1927,
Homo sapiens ENSG00000135316 ortholog_one2one 1 retrogene
retro_hsap_2410,
Macaca mulatta ENSMMUG00000010970 within_species_paralog 1 retrogene
retro_mmul_2433,
Nomascus leucogenys ENSNLEG00000012879 ortholog_one2one 1 retrogene
retro_nleu_162,
Oryctolagus cuniculus ENSOCUG00000000601 ortholog_one2one 1 retrogene
retro_ocun_1683,
Pongo abelii ENSPPYG00000016819 ortholog_one2one 1 retrogene
retro_pabe_1775,
Pan troglodytes ENSPTRG00000018393 ortholog_one2one 1 retrogene
retro_ptro_1387,
Rattus norvegicus ENSRNOG00000000204 ortholog_one2one 1 retrogene
retro_rnor_805,
Sus scrofa ENSSSCG00000004294 ortholog_one2one 1 retrogene
retro_sscr_436,
Vicugna pacos ENSVPAG00000001061 ortholog_one2one 1 retrogene
retro_vpac_391,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1843 98.36 75.98
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Download FASTA sequences of all ENSMMUG00000012575 retrocopies