Parental gene:

DNAJC17, ENSMMUG00000013160

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:19144823..19188091(-)


>ENSMMUG00000013160
ATGGCAGTGACCAAGGAGCTCTTACAGATGGACCTGTACGCGCTGCTAGGCATTGAGGAGAAGGCAGCGGACAAAGAGGT
AAAGAAGGCATATAGGCAGAAGGCCCTCTCCTGCCACCCAGACAAAAATCCAGATAATCCAAGAGCAGCTGAACTCTTCC
ACCAGCTTTCTCAGGCCTTGGAGGTGCTGACTGATGCTGCAGCAAGGGCTGCATATGACAAGGTCAGGAAAGCCAAGAAG
CAGGCAGCAGAGAGGACCCAGAAACTAGATGAAAAAAGGAAGAAAGTGAAGCTTGACCTGGAGGCCCGGGAGCGGCAGGC
CCAGGCCCAGGAGAGTGAGGAGGAAGAGGAGAGCCGGAGCACCAGGACACTAGAGCAAGAGATCGAACGCCTGAGAGAGG
AGGGTTCTCGGCAGCTGGAGGAACAGCAGAGGCTGATCCGGGAGCAGATACGCCAGGAGCATGACCACAGGTTGAGAGGA
AAGGCAGAAAATACTGAAGGCCAAGGAACCCCCAAACTAAAGCTAAAATGGAAGTGCAAGAAGGAGGATGAGTCAAAAAG
TGGCTACTCCAAAGACGTCCTCCTACGGCTTTTGCAAAAGTATGGCGAGGTTCTCAACCTGGTGCTTTCCAGTAAGAAGC
CAGGCACTGCTGTGGTGGAGTTTGCAACTGTCAAGGCGGCGGAGCTGGCTGTCCAGAATGAAGTTGGCCTGGTGGATAAC
CCTCTGAAGATTTCCTGGTTGGAGGGACAGCCCCAGGGTGCCGTGGGCCACAGCCACTCAGGACTGTCAAAGGGCTCAGT
ACTGTCAGAGAGGGACTATGAGAGTCTCGTCATGATGCGCATGCGCCAGGCGGCTGAGCGGCAACAGCTGATCGCAAGGA
TGCAGCAGGAGGACCAGGAGGGGCCGCCCACGTAG

Library Parental gene expression (RPM)
SRP007412_brain 4 .15 RPM
SRP007412_brain_prefrontal_cortex 9 .52 RPM
SRP007412_cerebellum 7 .43 RPM
SRP007412_heart 4 .89 RPM
SRP007412_kidney 3 .29 RPM
SRP007412_liver 4 .63 RPM
SRP007412_testis 4 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020803 ortholog_one2many 4 retrogenes
retro_cjac_1013, retro_cjac_4017, retro_cjac_738, retro_cjac_820,
Cavia porcellus ENSCPOG00000014110 ortholog_one2many 1 retrogene
retro_cpor_693,
Homo sapiens ENSG00000104129 ortholog_one2one 2 retrogenes
retro_hsap_2363, retro_hsap_3468,
Gorilla gorilla ENSGGOG00000000051 ortholog_one2one 1 retrogene
retro_ggor_2340,
Macropus eugenii ENSMEUG00000005641 ortholog_one2many 2 retrogenes
retro_meug_1387, retro_meug_2001,
Myotis lucifugus ENSMLUG00000014835 ortholog_many2many 1 retrogene
retro_mluc_317,
Mus musculus ENSMUSG00000034278 ortholog_one2one 1 retrogene
retro_mmus_3346,
Nomascus leucogenys ENSNLEG00000003257 ortholog_one2one 1 retrogene
retro_nleu_343,
Pongo abelii ENSPPYG00000006360 ortholog_one2one 1 retrogene
retro_pabe_2864,
Pan troglodytes ENSPTRG00000006929 ortholog_one2one 2 retrogenes
retro_ptro_1729, retro_ptro_2351,
Rattus norvegicus ENSRNOG00000012368 ortholog_one2many 2 retrogenes
retro_rnor_18, retro_rnor_2319,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1574 77.26 98.03
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Download FASTA sequences of all ENSMMUG00000013160 retrocopies