Parental gene:

Dnajc17, ENSMUSG00000034278

Aliases:Dnajc17, 1700025B16Rik, C87112, D9Bwg1371e
Description:DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:MGI Symbol;Acc:MGI:1916658]
Organism:Mouse (Mus musculus)
Coordinates:2:119172499..119208795(-)


>ENSMUSG00000034278
ATGGCGGTGACCAAAGAGCTCTTACAAATGGATCTGTACGCGCTGCTCGGCATTGAGGAGAAGGCGGCAGACAAAGAGGT
GAAGAAGGCGTACAGGCAAAAAGCACTATCCTGCCACCCAGACAAAAATCCAGATAACCCCAGAGCAGCTGAACTCTTCC
ACCAGCTGTCCCAGGCCTTGGAAGTGCTGACGGATGCTGCAGCCAGGGCTGCATATGACAAGGTTAGGAAAGCCAAGAAG
CAGGCAGCAGAGAGGACCCAGAGACTTGACGAGAACAGGAAGAAAGTGAAACTTGATCTGGAGGCCAGGGAGCGGCAGGC
CCAGGCCCATGGGAGTGAGGAAGAGGAGGAGAGCAGGAGCGCCACCACACTAGAGCAGGAGATTGCTCGACTTCGAGAAG
AGGGTTCCCGTCAGTTGGAAGAGCAGCAGAGGCTGATCCAGGAGCAGATCCGCCAGGACCGAGAACAGAGGCTGAGAGGA
AGAACAGAAAATACTGAAGGCAAAGGAACCCCCAAACTAAAGCTAAAGTGGAAGTGCAAGAAGGAGGATGAGTCCCAAGG
TGGCTACTCCAGAGATGTCCTCCTGAGGCTTTTACAGAAGTATGGGGAGGTTCTCAACCTGGTACTTTCCAGAAAGAAGG
CAGGCAATGCCATAGTGGAGTTTGCAACTGTCAGAGCTGCGGAGCTGGCTGTCAGAAATGAAGTGGGCCTGGCTGACAAC
CCTCTGAAGGTTTCCTGGTTGGAGGGACAGCCCCAGAGCACAGTGGACCCCGGCCCCCCAGGACTGTCAAAGGGCTCAGT
GCTGTCAGAAAGGGACTTTGAGAGTCTCGTCATGATGCGCATGCGCCAGGCAGCTGAGCGCCAGCAGCTGATTGCCCAGA
TGCAGCAGGAAGATGAGGGGCGGCCCACGTAG

Library Parental gene expression (RPM)
SRP007412_brain 4 .53 RPM
SRP007412_cerebellum 4 .34 RPM
SRP007412_heart 3 .27 RPM
SRP007412_kidney 2 .79 RPM
SRP007412_liver 1 .09 RPM
SRP007412_testis 6 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020803 ortholog_one2many 4 retrogenes
retro_cjac_1013, retro_cjac_4017, retro_cjac_738, retro_cjac_820,
Cavia porcellus ENSCPOG00000014110 ortholog_one2one 1 retrogene
retro_cpor_693,
Homo sapiens ENSG00000104129 ortholog_one2one 2 retrogenes
retro_hsap_2363, retro_hsap_3468,
Gorilla gorilla ENSGGOG00000000051 ortholog_one2one 1 retrogene
retro_ggor_2340,
Macropus eugenii ENSMEUG00000005641 ortholog_one2one 2 retrogenes
retro_meug_1387, retro_meug_2001,
Myotis lucifugus ENSMLUG00000014835 ortholog_one2many 1 retrogene
retro_mluc_317,
Macaca mulatta ENSMMUG00000013160 ortholog_one2one 1 retrogene
retro_mmul_1574,
Nomascus leucogenys ENSNLEG00000003257 ortholog_one2one 1 retrogene
retro_nleu_343,
Pongo abelii ENSPPYG00000006360 ortholog_one2one 1 retrogene
retro_pabe_2864,
Pan troglodytes ENSPTRG00000006929 ortholog_one2one 2 retrogenes
retro_ptro_1729, retro_ptro_2351,
Rattus norvegicus ENSRNOG00000012368 ortholog_one2many 2 retrogenes
retro_rnor_18, retro_rnor_2319,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3346 92.13 100.00
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Download FASTA sequences of all ENSMUSG00000034278 retrocopies