Parental gene: | MMU.12926, ENSMMUG00000015152 |
| Aliases: | None |
| Description: | splicing factor 45 [Source:RefSeq peptide;Acc:NP_001244661] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 9:6372701..6401206(+) |
>ENSMMUG00000015152
ATGTCCCTGTACGATGACCTAGGAGTGGAGACCAGTGACTCAAAAACAGAAGGCTGGTCCAAAAACTTCAAACTTCTGCA
GTCTCAGCTTCAGGTGAAGAAGGCAGCTCTCACTCAGGCAAAGAGCCAAAGGACGAAACAAAGTACAGTCCTCGCCCCAG
TCATTGACCTGAAGCGAGGTGGCTCCTCAGATGACCGGCAAATTGTGGACACGCCACCACATGTAGCAGCTGGGCTGAAG
GATCCTGTTCCCAGTGGGTTTTCTGCAGGGGAAGTTCTGATTCCCTTAGCTGACGAATATGACCCTATGTTTCCTAATGA
TTATGAGAAAGTAGTGAAGCGCCAAAGAGAGGAACGACAGAGACAGCGGGAGCTGGAAAGACAAAAGGAAATAGAAGAAA
GGGAAAAAAGGCGCAAAGACAGACATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGATGAAGATGAAGAT
TATGAGCGAGAGAGGAGGAAAAGAAGTATGGGCGGCGCTGCCATTGCCCCACCCACTTCTCTGGTGGAGAAAGACAAAGA
GTTACCCCGAGATTTTCCTTATGAAGAGGACTCAAGACCTCGATCACAGTCTTCCAAAGCTGCCATTCCTCCCCCAGTGT
ACGAGGAACAAGACAGACCGAGATCTCCAACTGGGCCTAGCAACTCCTTCCTCGCTAACATGGGGGGCACGGTGGCGCAC
AAGATCATGCAGAAGTACGGCTTCCGGGAGGGCCAGGGTCTGGGGAAGCACGAGCAGGGGCTGAGCACCGCCTTGTCAGT
GGAGAAGACCAGCAAGCGTGGCGGCAAGATCATCGTGGGTGACGCCACAGAGAAAGATGCATCCAAGAAGTCAGATTCAA
ATCCACTGACTGAAATACTTAAGTGTCCTACTAAAGTGGTCCTACTAAGGAACATGGTTGGTGCGGGAGAGGTGGATGAA
GACTTGGAAGTTGAAACCAAGGAAGAATGTGAAAAATATGGCAAAGTTGGAAAATGTGTGATATTTGAAATTCCTGGTGC
CCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAGAGAGTTGAATCAGCAATTAAAGCGGTTGTTGACTTGAATG
GGAGGTATTTTGGTGGACGGGTGGTAAAAGCATGTTTCTACAATTTGGACAAATTCAGGGTCTTGGATTTGGCAGAACAA
GTTTGA
ATGTCCCTGTACGATGACCTAGGAGTGGAGACCAGTGACTCAAAAACAGAAGGCTGGTCCAAAAACTTCAAACTTCTGCA
GTCTCAGCTTCAGGTGAAGAAGGCAGCTCTCACTCAGGCAAAGAGCCAAAGGACGAAACAAAGTACAGTCCTCGCCCCAG
TCATTGACCTGAAGCGAGGTGGCTCCTCAGATGACCGGCAAATTGTGGACACGCCACCACATGTAGCAGCTGGGCTGAAG
GATCCTGTTCCCAGTGGGTTTTCTGCAGGGGAAGTTCTGATTCCCTTAGCTGACGAATATGACCCTATGTTTCCTAATGA
TTATGAGAAAGTAGTGAAGCGCCAAAGAGAGGAACGACAGAGACAGCGGGAGCTGGAAAGACAAAAGGAAATAGAAGAAA
GGGAAAAAAGGCGCAAAGACAGACATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGATGAAGATGAAGAT
TATGAGCGAGAGAGGAGGAAAAGAAGTATGGGCGGCGCTGCCATTGCCCCACCCACTTCTCTGGTGGAGAAAGACAAAGA
GTTACCCCGAGATTTTCCTTATGAAGAGGACTCAAGACCTCGATCACAGTCTTCCAAAGCTGCCATTCCTCCCCCAGTGT
ACGAGGAACAAGACAGACCGAGATCTCCAACTGGGCCTAGCAACTCCTTCCTCGCTAACATGGGGGGCACGGTGGCGCAC
AAGATCATGCAGAAGTACGGCTTCCGGGAGGGCCAGGGTCTGGGGAAGCACGAGCAGGGGCTGAGCACCGCCTTGTCAGT
GGAGAAGACCAGCAAGCGTGGCGGCAAGATCATCGTGGGTGACGCCACAGAGAAAGATGCATCCAAGAAGTCAGATTCAA
ATCCACTGACTGAAATACTTAAGTGTCCTACTAAAGTGGTCCTACTAAGGAACATGGTTGGTGCGGGAGAGGTGGATGAA
GACTTGGAAGTTGAAACCAAGGAAGAATGTGAAAAATATGGCAAAGTTGGAAAATGTGTGATATTTGAAATTCCTGGTGC
CCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAGAGAGTTGAATCAGCAATTAAAGCGGTTGTTGACTTGAATG
GGAGGTATTTTGGTGGACGGGTGGTAAAAGCATGTTTCTACAATTTGGACAAATTCAGGGTCTTGGATTTGGCAGAACAA
GTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 32 .45 RPM |
| SRP007412_brain | 43 .25 RPM |
| SRP007412_cerebellum | 60 .12 RPM |
| SRP007412_heart | 33 .09 RPM |
| SRP007412_kidney | 40 .61 RPM |
| SRP007412_liver | 19 .59 RPM |
| SRP007412_testis | 56 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021951 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000005206 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020573 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000008939 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000013077 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000134453 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000011347 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000037197 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015687 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002067 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002265 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013591 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001344 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_771 | 69.96 | 59.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1209 | 68.85 | 59.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000015152 retrocopies