Parental gene:

RBM17, ENSPPYG00000002067

Aliases:None
Description:RNA binding motif protein 17 [Source:HGNC Symbol;Acc:16944]
Organism:Orangutan (Pongo abelii)
Coordinates:10:6447290..6476272(+)


>ENSPPYG00000002067
ATGTCCCTGTACGATGACCTAGGAGTGGAGACCAGTGACTCAAAAACAGAAGGCTGGTCCAAAAACTTCAAACTTCTGCA
GTCTCAGCTTCAGGTGAAGAAGGCAGCTCTCACTCAGGCAAAGAGCCAAAGGACGAAACAAAGTACAGTCCTCGCCCCAG
TCATTGACCTGAAGCGAGGTGGCTCCTCAGATGACCGGCAAATTGTGGACACTCCACCGCATGTAGCAGCTGGGCTGAAG
GATCCTGTTCCCAGTGGGTTTTCTGCAGGGGAAGTTCTGATTCCCTTAGCTGATGAATATGACCCTATGTTTCCTAATGA
TTATGAGAAAGTAGTGAAGCGCCAAAGAGAGGAACGACAGAGACAGCGGGAGCTGGAAAGACAAAAGGAAATAGAAGAAA
GGGAAAAAAGGCGTAAAGACAGACATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGATGAAGATGAAGAT
TATGAGCGAGAGAGGAGGAAAAGAAGTATGGGCGGAGCTGCCATTGCCCCACCCACTTCTCTGGTAGAGAAAGACAAAGA
GTTACCCCGAGATTTTCCTTATGAAGAGGATTCAAGACCTCGATCACAGTCTTCCAAAGCAGCCATTCCTCCTCCAGTGT
ACGAGGAACAAGACAGACCGAGATCTCCAACCGGACCTAGCAACTCCTTCCTCGCTAATATGGGGGGTACGGTGGCGCAC
AAGATCATGCAGAAGTACGGCTTCCGGGAGGGCCAGGGTCTGGGGAAGCACGAGCAGGGCCTGAGCACTGCCTTGTCAGT
GGAGAAGACCAGCAAGCGTGGCGGCAAGATCATCGTGGGCGACGCCACAGAGAAAGATGCATCCAAGAAGTCAGATTCAA
ATCCGCTGACTGAAATACTTAAGTGTCCTACTAAAGTGGTCCTACTAAGGAACATGGTTGGTGCAGGAGAGGTGGATGAA
GACTTGGAAGTTGAAACCAAGGAAGAATGTGAAAAATATGGCAAAGTTGGAAAATGTGTGATATTTGAAATTCCTGGTGC
CCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAGAGAGTTGAATCAGCAATTAAAGCGGTTGTTGACTTGAATG
GGAGGTATTTTGGTGGACGGGTGGTAAAAGCATGTTTCTACAATTTGGACAAATTCAGGGTCTTGGATTTGGCAGAACAA
GTTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 42 .79 RPM
SRP007412_cerebellum 50 .34 RPM
SRP007412_heart 27 .73 RPM
SRP007412_kidney 41 .33 RPM
SRP007412_liver 31 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021951 ortholog_one2many 2 retrogenes
retro_btau_1057, retro_btau_530,
Canis familiaris ENSCAFG00000005206 ortholog_one2many 1 retrogene
retro_cfam_844,
Callithrix jacchus ENSCJAG00000020573 ortholog_one2one 1 retrogene
retro_cjac_432,
Equus caballus ENSECAG00000008939 ortholog_one2many 1 retrogene
retro_ecab_547,
Erinaceus europaeus ENSEEUG00000013077 ortholog_one2many 1 retrogene
retro_eeur_390,
Homo sapiens ENSG00000134453 ortholog_one2one 1 retrogene
retro_hsap_1551,
Macropus eugenii ENSMEUG00000011347 ortholog_one2many 1 retrogene
retro_meug_438,
Macaca mulatta ENSMMUG00000015152 ortholog_one2one 2 retrogenes
retro_mmul_1209, retro_mmul_771,
Mus musculus ENSMUSG00000037197 ortholog_one2many 1 retrogene
retro_mmus_2855,
Otolemur garnettii ENSOGAG00000015687 ortholog_one2many 1 retrogene
retro_ogar_1119,
Pan troglodytes ENSPTRG00000002265 ortholog_one2one 1 retrogene
retro_ptro_1044,
Ictidomys tridecemlineatus ENSSTOG00000013591 ortholog_one2many 1 retrogene
retro_itri_1376,
Tursiops truncatus ENSTTRG00000001344 ortholog_one2many 1 retrogene
retro_ttru_1758,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1284 85.07 54.36
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Download FASTA sequences of all ENSPPYG00000002067 retrocopies