Parental gene:

HADH, ENSMMUG00000023254

Aliases:HADH, HADHSC
Description:hydroxyacyl-coenzyme A dehydrogenase, mitochondrial [Source:RefSeq peptide;Acc:NP_001248138]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:5:100918036..100965458(+)


>ENSMMUG00000023254
GGGAGGAGCGGGCCTCAAGGCCCCGCCCCGCTGTCTGGTGACGTCACGGTGACGCCAGGGGAGCTCGGGAGGCAGGGCCG
CGTAGGTCCCCACCCCCAAAGGCTGGCTTTCCGCTGCTACCCGCCAGGCGCATCTTCTCCGCCCGCGTCTCGTCGCTGTC
GCCCCCGCTGCCACACCATGGCCTTTGTCACCAGGCAGTTCATGCGTTCCATGTCCTCCTCGTCCACCGCCTCGGCCTCG
GCCAAGAAGATAATCGTCAAGCACGTGACGGTCATCGGCGGCGGGCTGATGGGCGCCGGCATCGCCCAGGTTGCTGCAGC
AACTGGTCACACAGTAGTGTTGGTAGACCAGACAGAGGACATTCTGGCAAAATCCAAAAAGGGAATTGAGGAAAGCCTTA
GGAAAGTGGCAAAGAAGAAGTTTGCAGAAAACCCTAAGGCTGGCGGTGAATTTGTGGAGAAGACCTTGAGCAGCATAGCG
ACCAGCACGGATGCAGCCTCTGTTGTCCACAGCACAGACTTGGTGGTGGAAGCCATCGTGGAGAATCTGAAGGTGAAAAA
CGAGCTCTTCAAAAGGCTGGACAAGTTTGCTGCTGAACATACAATCTTTGCCAGCAACACTTCCTCCTTGCAGATTACAA
GCATAGCCAATGCCACCACCAGACAAGACCGATTCGCTGGCCTCCATTTCTTCAACCCAGTGCCCCTGATGAAACTTGTG
GAGGTCATTAAAACACCAATGACCAGCCAGAAGACATTTGAATCTTTGGTAGACTTTAGCAAAGCCCTGGGAAAGCATCC
TGTTGCTTGCAAGGACACTCCTGGGTTTATTGTGAACCGCCTCCTGGTTCCATACCTCATGGAAGCAATCAGGCTGTATG
AACGAGACTTCCAAACGTGTGGCAATTCTAACTCAGGTTTGGGATTTTCTTTAAAAGGTGATGCATCCAAAGAAGACATT
GACACTGCTATGAAATTAGGAGCCGGTTACCCCATGGGCCCATTTGAGCTTCTAGATTATGTCGGACTAGATACTACAAA
GTTCATCGTGGATGGGTGGCATGAAATAGATGTGAAGAACCCATTACATCAGCCCAGCCCATTCTTGAATAAGCTGGTAG
CAGAGAACAAGTTTGGCAAGAAGACTGGAGAAGGATTTTACAAATACAAATGA

Library Parental gene expression (RPM)
SRP007412_brain 14 .12 RPM
SRP007412_brain_prefrontal_cortex 16 .66 RPM
SRP007412_cerebellum 14 .59 RPM
SRP007412_heart 94 .33 RPM
SRP007412_kidney 207 .63 RPM
SRP007412_liver 106 .01 RPM
SRP007412_testis 35 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002049 ortholog_one2one 2 retrogenes
retro_btau_1111, retro_btau_1685,
Callithrix jacchus ENSCJAG00000015938 ortholog_one2one 1 retrogene
retro_cjac_772,
Echinops telfairi ENSETEG00000013807 ortholog_one2one 1 retrogene
retro_etel_1694,
Felis catus ENSFCAG00000022260 ortholog_one2one 1 retrogene
retro_fcat_1225,
Homo sapiens ENSG00000138796 ortholog_one2one 1 retrogene
retro_hsap_1571,
Gorilla gorilla ENSGGOG00000004423 ortholog_one2one 1 retrogene
retro_ggor_1196,
Macaca mulatta ENSMMUG00000004380 within_species_paralog 2 retrogenes
retro_mmul_1987, retro_mmul_787,
Nomascus leucogenys ENSNLEG00000012951 ortholog_one2one 1 retrogene
retro_nleu_1738,
Pongo abelii ENSPPYG00000014986 ortholog_one2one 1 retrogene
retro_pabe_1296,
Pan troglodytes ENSPTRG00000016351 ortholog_one2one 1 retrogene
retro_ptro_1058,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2217 72.04 88.22
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Download FASTA sequences of all ENSMMUG00000023254 retrocopies