Parental gene:

HADH, ENSPPYG00000014986

Aliases:None
Description:hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:4799]
Organism:Orangutan (Pongo abelii)
Coordinates:4:112718899..112767527(+)


>ENSPPYG00000014986
ATGGCCTTCGTCACCAGGCAGTTCATGCGTTCCGTGTCCTCCTCGTCCACCGCCTCGGCCTCGGCCAAGAAGATAATCGT
CAAGCACGTGACCGTCATCGGCGGCGGGCTGATGGGCGCCGGCATTGCCCAGGTTGCTGCAGCAACTGGTCACACAGTAG
TGTTGGTAGACCAGACAGAGGACATCCTGGCAAAATCCAAAAAGGGAATTGAGGAAAGCCTTAGGAAAGTGGCAAAGAAG
AAGTTTGCAGAAAACCCTAAGGCTGGCGATGAATTTGTGGAGAAGACCCTGAGCAGCATAACGACCAGCACGGATGCAGC
CTCCGTTGTCCACAGCGCAGACTTGGTGGTGGAAGCCATCGTGGAGAATCTGAAGGTGAAAAACGAGCTCTTCAAAAGGC
TGGACAAGTTTGCTGCTGAACATACAATCTTTGCCAGCAACACTTCCTCCTTGCAGATTACAAGCATAGCCAATGCCACC
ACCAGACAAGACCGATTCGCTGGCCTCCATTTCTTCAACCCAGTGCCCGTCATGAAACTTGTGGAGGTCATTAAAACACC
AATGACCAGCCAGAAGACATTTGAATCTTTGGTAGACTTTAGCAAAGCCCTAGGAAAGCATCCTGTTTCTTGCAAGGACA
CTCCTGGGTTTATTGTGAACCGCCTCCTGGTTCCATACCTCATGGAAGCAATCAGGCTGTATGAACGAGGTGATGCATCC
AAAGAGGACATTGACACTGCTATGAAATTAGGAGCCGGTTACCCCATGGGCCCATTTGAGCTTCTAGATTATGTCGGACT
GGATACTACGAAGTTCATCGTGGATGGGTGGCATGAAATGGATGCAGAGAACCCATTACATCAGCCCAGCCCATGCTTGA
ATAAGCTGGTAGCAGAGAACAAGTTCGGCAAGAAGACTGGAGAAGGATTTTACAAATACAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 23 .11 RPM
SRP007412_cerebellum 25 .54 RPM
SRP007412_heart 163 .64 RPM
SRP007412_kidney 159 .80 RPM
SRP007412_liver 109 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002049 ortholog_one2one 2 retrogenes
retro_btau_1111, retro_btau_1685,
Callithrix jacchus ENSCJAG00000015938 ortholog_one2one 1 retrogene
retro_cjac_772,
Echinops telfairi ENSETEG00000013807 ortholog_one2one 1 retrogene
retro_etel_1694,
Felis catus ENSFCAG00000022260 ortholog_one2one 1 retrogene
retro_fcat_1225,
Homo sapiens ENSG00000138796 ortholog_one2one 1 retrogene
retro_hsap_1571,
Gorilla gorilla ENSGGOG00000004423 ortholog_one2one 1 retrogene
retro_ggor_1196,
Macaca mulatta ENSMMUG00000023254 ortholog_one2one 1 retrogene
retro_mmul_2217,
Nomascus leucogenys ENSNLEG00000012951 ortholog_one2one 1 retrogene
retro_nleu_1738,
Pongo abelii ENSPPYG00000012583 within_species_paralog 2 retrogenes
retro_pabe_2576, retro_pabe_817,
Pan troglodytes ENSPTRG00000016351 ortholog_one2one 1 retrogene
retro_ptro_1058,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1296 75.18 88.22
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Download FASTA sequences of all ENSPPYG00000014986 retrocopies