Parental gene:

HADH, ENSPTRG00000016351

Aliases:HADH, HADHSC
Description:Hydroxyacyl-CoA dehydrogenase [Source:UniProtKB/TrEMBL;Acc:K7AUA4]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:110592353..110637780(+)


>ENSPTRG00000016351
ATGGCCTTCGTCACCAGGCAGTTAATGCGTTCCGTGTCCTCCTCGTCCACCGCCTCGGCCTCGGCCAAGAAGATAATCGT
CAAGCACGTGACGGTCATCGGCGGCGGGCTGATGGGCGCCGGCATTGCCCAGGTTGCTGCAGCAACTGGTCACACAGTAG
TGTTGGTAGACCAGACAGAGGACATCCTGGCAAAATCCAAAAAGGGAATTGAGGAAAGCCTTAGGAAAGTGGCAAAGAAG
AAGTTTGCAGAAAACCCTAAGGCCGGCGATGAATTTGTGGAGAAGACCCTGAGCACCATAGTGACCAGCACGGATGCAGC
CTCCGTTGTCCACAGCACAGACTTGGTGGTGGAAGCCATCGTGGAGAATCTGAAGGTGAAAAACGAGCTCTTCAAAAGGC
TGGACAAGTTTGCTGCTGAACATACAATCTTTGCCAGCAACACTTCCTCCTTGCAGATTACAAGCATAGCCAATGCCACC
ACCAGACAAGACCGATTCGCTGGCCTCCATTTCTTCAACCCAGTGCCGGTCATGAAACTTGTGGAGGTCATTAAAACACC
AATGACCAGCCAGAAGACATTTGAATCTTTGGTAGACTTTAGCAAAGCCCTAGGAAAGCATCCTGTTTCTTGCAAGGACA
CTCCTGGGTTTATTGTGAACCGCCTCCTGGTTCCATACCTCATGGAAGCAATCAGGCTGTATGAACGAGACTTCCAAACG
TGTGGTGATTCTAACTCGGGTTTGGGCTTTTCTTTAAAAGGTGACGCATCCAAAGAAGACATTGACACTGCTATGAAATT
AGGAGCCGGTTACCCCATGGGCCCATTTGAGCTTCTAGATTATGTCGGACTGGATACTACGAAGTTCATCGTGGATGGGT
GGCATGAAATGGATGCAGAGAACCCATTACATCAGCCCAGCCCATCCTTAAATAAGCTGGTAGCAGAGAACAAGTTCGGC
AAGAAGACTGGAGAAGGATTTTACAAATACAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .12 RPM
SRP007412_cerebellum 22 .19 RPM
SRP007412_heart 172 .63 RPM
SRP007412_kidney 218 .81 RPM
SRP007412_liver 97 .52 RPM
SRP007412_testis 40 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002049 ortholog_one2one 2 retrogenes
retro_btau_1111, retro_btau_1685,
Callithrix jacchus ENSCJAG00000015938 ortholog_one2one 1 retrogene
retro_cjac_772,
Echinops telfairi ENSETEG00000013807 ortholog_one2one 1 retrogene
retro_etel_1694,
Felis catus ENSFCAG00000022260 ortholog_one2one 1 retrogene
retro_fcat_1225,
Homo sapiens ENSG00000138796 ortholog_one2one 1 retrogene
retro_hsap_1571,
Gorilla gorilla ENSGGOG00000004423 ortholog_one2one 1 retrogene
retro_ggor_1196,
Macaca mulatta ENSMMUG00000023254 ortholog_one2one 1 retrogene
retro_mmul_2217,
Nomascus leucogenys ENSNLEG00000012951 ortholog_one2one 1 retrogene
retro_nleu_1738,
Pongo abelii ENSPPYG00000014986 ortholog_one2one 1 retrogene
retro_pabe_1296,
Pan troglodytes ENSPTRG00000011732 within_species_paralog 2 retrogenes
retro_ptro_2109, retro_ptro_664,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1058 76.50 60.12
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Download FASTA sequences of all ENSPTRG00000016351 retrocopies