Parental gene:

SBDS, ENSMODG00000006644

Aliases:None
Description:Shwachman-Bodian-Diamond syndrome [Source:HGNC Symbol;Acc:19440]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:508564675..508571511(-)


>ENSMODG00000006644
ATGTCCATCTTCACGCCCACTAACCAGATCCGCCTGACGAACGTGGCCGTAGTGCGCATGAAGCGTGCGGGGAAGCGCTT
TGAAATCGCTTGCTACAAGAACAAGGTCGTGGGCTGGCGCAGCGGCGTGGAAAAAGACCTTGATGAAGTCTTGCAGACCC
ACTCAGTGTTTGTAAATGTCTCTAAAGGCCAAGTTGCTAAAAAGGAAGATCTTATCAGTGCTTTTGGGACAGATGACCAG
ACAGAAATCTGTAAACAGATTTTAACAAAAGGAGAAGTACAAGTGTCAGATAAAGAACGACACACACAACTGGAGCAGAT
GTTTAGAGATATTGCAACAATTGTGGCAGATAAATGTGTTAATCCTGAAACGAAGAGACCATACACTGTCATCCTCATTG
AAAGAGCAATGAAGGATATCCACTATTCGGTCAAACCCAACAAGAGTACAAAGCAGCAGGCTTTGGAAGTAATAAAACAG
TTGAAGGAAAGCATGAAGATTGAGCGAGCCCACATGAGACTTCGATTCATCCTACCTGTGAGGGAAGGAAAAAAGCTAAA
AGAAAAACTCAAACCATTGATCAAGGTGATAGAAAGTGAAGACTTTGGTGAACAGTTAGAAATTGTATGTCTAATTGACC
CGGGCTGCTTCAGAGAAATTGATGAGCTGATACAGAGAGAGACAAAAGGAAAAGGTTCTTTGGAAGTTCTCAGCTTGAAA
GATGTGGAAGAAGGAGACGAGAAATTTGAATGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003795 ortholog_one2one 2 retrogenes
retro_chof_1999, retro_chof_623,
Callithrix jacchus ENSCJAG00000004283 ortholog_one2one 1 retrogene
retro_cjac_3984,
Dasypus novemcinctus ENSDNOG00000016904 ortholog_one2one 1 retrogene
retro_dnov_748,
Loxodonta africana ENSLAFG00000008763 ortholog_one2one 1 retrogene
retro_lafr_920,
Mus musculus ENSMUSG00000025337 ortholog_one2one 1 retrogene
retro_mmus_950,
Otolemur garnettii ENSOGAG00000009011 ortholog_one2many 1 retrogene
retro_ogar_3368,
Ochotona princeps ENSOPRG00000008721 ortholog_one2one 6 retrogenes
retro_opri_1179, retro_opri_154, retro_opri_363, retro_opri_484, retro_opri_698, retro_opri_957,
Rattus norvegicus ENSRNOG00000000888 ortholog_one2many 1 retrogene
retro_rnor_686,
Ictidomys tridecemlineatus ENSSTOG00000022203 ortholog_one2one 1 retrogene
retro_itri_1763,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_2004 81.34 52.80
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Download FASTA sequences of all ENSMODG00000006644 retrocopies