Parental gene: | SBDS, ENSOPRG00000008721 |
| Aliases: | None |
| Description: | Shwachman-Bodian-Diamond syndrome [Source:HGNC Symbol;Acc:19440] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_5260:1834..19947(-) |
>ENSOPRG00000008721
ATGTCCATCTTCACCCCCACCAACCAGATCCGCCTGACCAATGTGGCCGTGGTGCGCATGAAGCGCGCGGGCAAGCGCTT
CGAGATCGCCTGCTACAAGAACAAGGTGGTCGGCTGGCGCACCGGCGTGGAGAAAGACCTCGATGAAGTTCTGCAGACCC
ACTCGGTGTTTGTGAACGTCTCGAAGGGTCAGGTTGCAAAGAAGGATGACCTCATTAGCGCGTTTGGAACCGACGACCAG
ACTGAAATCTGCAGACAGATTCTGACTAAAGGAGAACTTCAGGTGTCAGACAAGGAGAGGCACACACAGCTGGAGCAGAT
GTTTAGGGACATTGCAACGATCGTAGCCGACAAATGTGTGAACCCTGAAACAAAGAGACCATACACCGTTATTCTGATAG
AGCGAGCCATGAAAGACATCCACTATTCGGTCAAAACCAACAAGAGCACGAAACAGCAGGCTTTGGAAGTAATCAAGCAG
CTGAAGGAGAAAATGAAGATAGAGCGTGCGCACATGAGACTGCGGTTCATCCTCCCGGTGAACGAGGGCAAGAAGCTGAA
GGAGAAGCTCAAGCCGCTCATCAAGGTCGTGGAAAGCGAGGACTACAGTCAGCAGGTGGAAATGGTGTGCCTCATTGACC
CGGGCTGCTTCCGAGAAATCGATGAGCTCATTAAGAAGGAAACCAAAGGCAGAGGTTCGTTGGAGGTGCTGAGTCTGAAA
GACGTGGAGGAAGGAGACGAGAAGTTTGAATGA
ATGTCCATCTTCACCCCCACCAACCAGATCCGCCTGACCAATGTGGCCGTGGTGCGCATGAAGCGCGCGGGCAAGCGCTT
CGAGATCGCCTGCTACAAGAACAAGGTGGTCGGCTGGCGCACCGGCGTGGAGAAAGACCTCGATGAAGTTCTGCAGACCC
ACTCGGTGTTTGTGAACGTCTCGAAGGGTCAGGTTGCAAAGAAGGATGACCTCATTAGCGCGTTTGGAACCGACGACCAG
ACTGAAATCTGCAGACAGATTCTGACTAAAGGAGAACTTCAGGTGTCAGACAAGGAGAGGCACACACAGCTGGAGCAGAT
GTTTAGGGACATTGCAACGATCGTAGCCGACAAATGTGTGAACCCTGAAACAAAGAGACCATACACCGTTATTCTGATAG
AGCGAGCCATGAAAGACATCCACTATTCGGTCAAAACCAACAAGAGCACGAAACAGCAGGCTTTGGAAGTAATCAAGCAG
CTGAAGGAGAAAATGAAGATAGAGCGTGCGCACATGAGACTGCGGTTCATCCTCCCGGTGAACGAGGGCAAGAAGCTGAA
GGAGAAGCTCAAGCCGCTCATCAAGGTCGTGGAAAGCGAGGACTACAGTCAGCAGGTGGAAATGGTGTGCCTCATTGACC
CGGGCTGCTTCCGAGAAATCGATGAGCTCATTAAGAAGGAAACCAAAGGCAGAGGTTCGTTGGAGGTGCTGAGTCTGAAA
GACGTGGAGGAAGGAGACGAGAAGTTTGAATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000003795 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004283 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000016904 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008763 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006644 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000025337 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009011 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000888 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022203 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_154 | 76.33 | 65.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_363 | 69.64 | 66.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_484 | 88.02 | 86.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_698 | 91.30 | 54.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_957 | 76.33 | 65.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_opri_1179 | 69.64 | 66.40 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000008721 retrocopies