RetrogeneDB - Parental gene ENSMODG00000015601 details

							
>ENSMODG00000015601
ATGGCCGCCCAAGGAGAACCCCAAGTGCAGTTCAAACTTGTATTAGTTGGTGATGGAGGTACTGGAAAAACTACATTTGT

AAAACGTCACTTGACTGGTGAATTTGAGAAGAAGTATGTAGCCACCTTGGGTGTTGAGGTCCATCCCCTTGTGTTCCATA

CTAACAGAGGTCCTATTAAATTCAACGTATGGGATACAGCTGGCCAAGAGAAATTTGGTGGTCTGAGAGATGGTTATTAC

ATCCAAGCTCAGTGTGCCATTATAATGTTTGATGTAACATCCAGAGTTACTTACAAGAATGTACCTAACTGGCATAGAGA

TCTGGTACGAGTATGTGAAAATATCCCTATAGTGTTGTGTGGCAACAAAGTGGATATTAAGGACAGAAAAGTCAAGGCGA

AATCAATTGTCTTCCATAGGAAGAAGAATCTCCAGTACTATGACATTTCAGCCAAAAGTAACTACAACTTTGAGAAGCCC

TTCCTTTGGCTTGCTAGAAAACTTATTGGAGACCCTAATTTGGAGTTTGTTGCCATGCCTGCTCTTGCACCTCCAGAGGT

TGTCATGGACCCAGCACTGGCAGCACAGTATGAGCAGGACTTACAGATTGCTCAGACAACTGCGCTCCCTGATGAAGATG

ATGACCTGTAA

Library	Parental gene expression (RPM)
SRP007412_brain	0 .00 RPM
SRP007412_cerebellum	0 .00 RPM
SRP007412_heart	0 .00 RPM
SRP007412_kidney	0 .00 RPM
SRP007412_liver	0 .00 RPM
SRP007412_testis	0 .00 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000004222	ortholog_many2many	4 retrogenes	retro_amel_1119, retro_amel_1625, retro_amel_1631, retro_amel_700,
Canis familiaris	ENSCAFG00000006670	ortholog_one2many	6 retrogenes	retro_cfam_1406, retro_cfam_1584, retro_cfam_1604, retro_cfam_2058, retro_cfam_426, retro_cfam_899,
Callithrix jacchus	ENSCJAG00000003927	ortholog_many2many	8 retrogenes	retro_cjac_1558, retro_cjac_1844, retro_cjac_2509, retro_cjac_2952, retro_cjac_3071, retro_cjac_3107, retro_cjac_4222, retro_cjac_492,
Dasypus novemcinctus	ENSDNOG00000009230	ortholog_one2many	12 retrogenes	retro_dnov_1154, retro_dnov_1269, retro_dnov_1485, retro_dnov_1543, retro_dnov_1585, retro_dnov_1795, retro_dnov_1924, retro_dnov_1945, retro_dnov_2142, retro_dnov_2189, retro_dnov_2613, retro_dnov_991,
Equus caballus	ENSECAG00000020532	ortholog_one2many	3 retrogenes	retro_ecab_195, retro_ecab_591, retro_ecab_680,
Echinops telfairi	ENSETEG00000011875	ortholog_many2many	18 retrogenes	retro_etel_1051, retro_etel_1161, retro_etel_1351, retro_etel_1365, retro_etel_1584, retro_etel_1673, retro_etel_1878, retro_etel_1896, retro_etel_1915, retro_etel_2141, retro_etel_2150, retro_etel_2189, retro_etel_294, retro_etel_383, retro_etel_409, retro_etel_412, retro_etel_514, retro_etel_813,
Felis catus	ENSFCAG00000027375	ortholog_one2many	6 retrogenes	retro_fcat_1097, retro_fcat_1230, retro_fcat_1297, retro_fcat_1586, retro_fcat_1904, retro_fcat_269,
Homo sapiens	ENSG00000132341	ortholog_one2many	3 retrogenes	retro_hsap_3126, retro_hsap_3446, retro_hsap_4908,
Gorilla gorilla	ENSGGOG00000015340	ortholog_many2many	4 retrogenes	retro_ggor_2142, retro_ggor_2328, retro_ggor_2556, retro_ggor_3066,
Loxodonta africana	ENSLAFG00000017673	ortholog_one2many	1 retrogene	retro_lafr_1253,
Microcebus murinus	ENSMICG00000000653	ortholog_one2many	4 retrogenes	retro_mmur_1270, retro_mmur_669, retro_mmur_791, retro_mmur_866,
Macaca mulatta	ENSMMUG00000020927	ortholog_one2many	2 retrogenes	retro_mmul_1990, retro_mmul_2641,
Mustela putorius furo	ENSMPUG00000004044	ortholog_one2many	6 retrogenes	retro_mputfur_1190, retro_mputfur_1523, retro_mputfur_228, retro_mputfur_755, retro_mputfur_784, retro_mputfur_899,
Mus musculus	ENSMUSG00000029430	ortholog_many2many	4 retrogenes	retro_mmus_1653, retro_mmus_182, retro_mmus_2029, retro_mmus_265,
Nomascus leucogenys	ENSNLEG00000008282	ortholog_many2many	4 retrogenes	retro_nleu_1565, retro_nleu_2303, retro_nleu_2353, retro_nleu_775,
Ornithorhynchus anatinus	ENSOANG00000006447	ortholog_one2many	1 retrogene	retro_oana_62,
Oryctolagus cuniculus	ENSOCUG00000026506	ortholog_many2many	2 retrogenes	retro_ocun_1139, retro_ocun_958,
Otolemur garnettii	ENSOGAG00000025046	ortholog_one2many	8 retrogenes	retro_ogar_1482, retro_ogar_1611, retro_ogar_2058, retro_ogar_2560, retro_ogar_2692, retro_ogar_2810, retro_ogar_377, retro_ogar_497,
Ochotona princeps	ENSOPRG00000002629	ortholog_one2many	7 retrogenes	retro_opri_1062, retro_opri_1227, retro_opri_514, retro_opri_622, retro_opri_647, retro_opri_74, retro_opri_97,
Pongo abelii	ENSPPYG00000005124	ortholog_one2many	3 retrogenes	retro_pabe_2582, retro_pabe_2853, retro_pabe_3815,
Pan troglodytes	ENSPTRG00000005636	ortholog_one2many	4 retrogenes	retro_ptro_1762, retro_ptro_2115, retro_ptro_2338, retro_ptro_3273,
Pteropus vampyrus	ENSPVAG00000014742	ortholog_one2many	15 retrogenes	retro_pvam_1023, retro_pvam_1049, retro_pvam_1328, retro_pvam_365, retro_pvam_485, retro_pvam_597, retro_pvam_61, retro_pvam_746, retro_pvam_770, retro_pvam_863, retro_pvam_933, retro_pvam_934, retro_pvam_935, retro_pvam_948, retro_pvam_968,
Rattus norvegicus	ENSRNOG00000000938	ortholog_many2many	3 retrogenes	retro_rnor_138, retro_rnor_410, retro_rnor_917,
Sarcophilus harrisii	ENSSHAG00000018018	ortholog_one2many	1 retrogene	retro_shar_538,
Sus scrofa	ENSSSCG00000009746	ortholog_one2many	3 retrogenes	retro_sscr_1136, retro_sscr_194, retro_sscr_771,
Ictidomys tridecemlineatus	ENSSTOG00000003992	ortholog_one2many	3 retrogenes	retro_itri_1009, retro_itri_1442, retro_itri_723,
Tursiops truncatus	ENSTTRG00000012732	ortholog_one2many	6 retrogenes	retro_ttru_1481, retro_ttru_204, retro_ttru_387, retro_ttru_439, retro_ttru_792, retro_ttru_892,
Vicugna pacos	ENSVPAG00000008880	ortholog_one2many	3 retrogenes	retro_vpac_436, retro_vpac_589, retro_vpac_85,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_mdom_100	95.37	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_mdom_543	97.22	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_mdom_580	54.62	53.24	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_mdom_806	90.23	61.57	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_mdom_814	94.91	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_mdom_969	84.30	56.02	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_mdom_1718	58.99	63.89	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_mdom_1990	89.81	94.91	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSMODG00000015601 retrocopies

Parental gene:	ENSMODG00000015601
Aliases:	None
Description:	None
Organism:	*Opossum (Monodelphis domestica)*
Coordinates:	3:469144932..469150770(-)

Parental gene:

ENSMODG00000015601