Parental gene:

RAN, ENSPVAG00000014742

Aliases:None
Description:RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:9846]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_16548:22086..22759(-)


>ENSPVAG00000014742
CAGTGTGCCATTATAATGTTCGACGTAACTTCGAGAGTTACTTACAAGAATGTGCCTAACTGGCATAGAGATCTGGTACG
AGTATGTGAAAACATCCCCATCGTGTTGTGTGGCAACAAAGTGGATATTAAGGACAGGAAAGTTAAGGCAAAATCAATTG
TCTTCCACCGAAAGAAGAATCTTCAGTACTATGACATTTCTGCCAAAAGCAACTACAACTTTGAAAAGCCCTTCCTCTGG
CTTGCTAGAAAACTAATCGGAGACCCTAACTTGGAGTTCGTTGCCATGCCTGCTCTCGCCCCACCGGAGGTTGTCATGGA
CCCAGCTTTGGCAGCACAGTATGAGCACGATCTAGAGGTTGCTCAGACAACTGCTCTGCCGGACGAGGATGACGACCTGT
GA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004222 ortholog_one2one 4 retrogenes
Canis familiaris ENSCAFG00000006670 ortholog_one2one 6 retrogenes
Callithrix jacchus ENSCJAG00000003927 possible_ortholog 8 retrogenes
Dasypus novemcinctus ENSDNOG00000009230 ortholog_one2one 12 retrogenes
Equus caballus ENSECAG00000020532 ortholog_one2one 3 retrogenes
Echinops telfairi ENSETEG00000011875 ortholog_one2one 18 retrogenes
Felis catus ENSFCAG00000027375 ortholog_one2one 6 retrogenes
Gorilla gorilla ENSGGOG00000015340 possible_ortholog 4 retrogenes
Microcebus murinus ENSMICG00000000653 ortholog_one2one 4 retrogenes
Monodelphis domestica ENSMODG00000015601 ortholog_one2many 8 retrogenes
Mustela putorius furo ENSMPUG00000004044 ortholog_one2one 6 retrogenes
Mus musculus ENSMUSG00000029430 possible_ortholog 4 retrogenes
Nomascus leucogenys ENSNLEG00000008282 possible_ortholog 4 retrogenes
Ornithorhynchus anatinus ENSOANG00000006447 ortholog_one2one 1 retrogene
Oryctolagus cuniculus ENSOCUG00000026506 ortholog_one2many 2 retrogenes
Ochotona princeps ENSOPRG00000002629 ortholog_one2one 7 retrogenes
Rattus norvegicus ENSRNOG00000000938 possible_ortholog 3 retrogenes
Sarcophilus harrisii ENSSHAG00000018018 ortholog_one2one 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000003992 ortholog_one2one 3 retrogenes
Vicugna pacos ENSVPAG00000008880 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_61 88.24 89.47
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2. retro_pvam_365 70.29 100.00
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3. retro_pvam_485 77.69 90.23
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4. retro_pvam_597 92.54 100.00
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5. retro_pvam_746 77.27 97.74
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6. retro_pvam_770 77.61 100.00
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7. retro_pvam_863 81.68 97.74
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8. retro_pvam_933 79.55 97.74
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9. retro_pvam_934 77.10 97.74
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10. retro_pvam_935 77.10 97.74
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11. retro_pvam_948 76.34 97.74
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12. retro_pvam_968 81.68 97.74
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13. retro_pvam_1023 75.24 76.69
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14. retro_pvam_1049 77.10 97.74
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15. retro_pvam_1328 77.10 97.74
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Download FASTA sequences of all ENSPVAG00000014742 retrocopies