Parental gene: | C6orf52, ENSMODG00000028324 |
| Aliases: | None |
| Description: | chromosome 6 open reading frame 52 [Source:HGNC Symbol;Acc:20881] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:331469142..331472846(+) |
>ENSMODG00000028324
ATGGCAAGGAGTTTGAGTTCTGCAGACTTTGATTTAATCCAGCAAAGCAATTATTTCTGGTACTGGCAATGGATGAAGAC
TGAGTTACAACTTGACCACTCTGGTACCTATTATCAACAGCACCAAACCTGCTATTTGCAGTCAGATTTTGAACCTTATT
TTGAATATAATTATAACTGTGTATTTTATGGGAATATTCAAGATGTCTCCTCTGCAAAGGAGAACACGAAAGATCTAGCT
GAAATTCCAGTCATGTCAGAGGATTGGACTACAAATAATGATGAAGAGCAAACTGAAGATCCACAGATTCACTTAGATAT
TGAGAACCTGAACAAGGAGTTTATGGTGGAAAGTGAAGAGCTTTATGATTCCCTAATGAATTGTCATTGGCAGCCTCTGG
ACACGGTTGCTTCTTGGATCCCAAATAATACCCAGGAGTAA
ATGGCAAGGAGTTTGAGTTCTGCAGACTTTGATTTAATCCAGCAAAGCAATTATTTCTGGTACTGGCAATGGATGAAGAC
TGAGTTACAACTTGACCACTCTGGTACCTATTATCAACAGCACCAAACCTGCTATTTGCAGTCAGATTTTGAACCTTATT
TTGAATATAATTATAACTGTGTATTTTATGGGAATATTCAAGATGTCTCCTCTGCAAAGGAGAACACGAAAGATCTAGCT
GAAATTCCAGTCATGTCAGAGGATTGGACTACAAATAATGATGAAGAGCAAACTGAAGATCCACAGATTCACTTAGATAT
TGAGAACCTGAACAAGGAGTTTATGGTGGAAAGTGAAGAGCTTTATGATTCCCTAATGAATTGTCATTGGCAGCCTCTGG
ACACGGTTGCTTCTTGGATCCCAAATAATACCCAGGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002583 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000030234 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000010768 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000008229 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003650 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000003001 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_322 | 92.47 | 63.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_336 | 65.00 | 65.75 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_453 | 79.82 | 73.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_492 | 86.67 | 92.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_513 | 65.60 | 85.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mdom_523 | 87.78 | 61.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mdom_534 | 82.39 | 96.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mdom_616 | 74.47 | 64.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mdom_746 | 70.24 | 56.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mdom_894 | 70.79 | 60.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mdom_1372 | 71.65 | 86.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_mdom_2019 | 61.90 | 99.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000028324 retrocopies