Parental gene:

C6orf52, ENSVPAG00000003001

Aliases:None
Description:chromosome 6 open reading frame 52 [Source:HGNC Symbol;Acc:20881]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_1184:155419..170912(-)


>ENSVPAG00000003001
GGTCTGGGCGGTAGGCGGGGAGGCGGTGTGCGGTGCTGTGGAGCCCTGTGTTTGGGGGCTTTTAGTAGGGCAGCAGTTCT
TGTTGCGTGGGAAACCGTGGCGACTTTTCTTTCTTTAACAGGCTGTGGTTATGCACTGGATGGAAATGGACCCAGCCTTT
ATTCTGCACGCGAGACCCCTGGACACCCAGCTGAACCTTTGCTCACACTCGAGGGAACCACAGCTCTGGCTGAAAACCCA
GATGAAGATTCGCTAGAAGNTCCAAATCTTCATTTTAATATTGAGGAGTTAAACAAGTTTATGGAGAAAAGTGAAGAACT
GTACAATTCTCTCATGAATTGCCACTGGCAGTCTCTGGATACAGTTCCCTCTGAAATCTCAGATGGGACCCCA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002583 ortholog_one2one 1 retrogene
retro_amel_1114,
Canis familiaris ENSCAFG00000030234 ortholog_one2one 1 retrogene
retro_cfam_1098,
Choloepus hoffmanni ENSCHOG00000010768 ortholog_one2one 2 retrogenes
retro_chof_2530, retro_chof_70,
Equus caballus ENSECAG00000008229 ortholog_one2one 2 retrogenes
retro_ecab_684, retro_ecab_792,
Monodelphis domestica ENSMODG00000028324 ortholog_one2one 12 retrogenes
retro_mdom_1372, retro_mdom_2019, retro_mdom_322, retro_mdom_336, retro_mdom_453, retro_mdom_492, retro_mdom_513, retro_mdom_523, retro_mdom_534, retro_mdom_616, retro_mdom_746, retro_mdom_894,
Tursiops truncatus ENSTTRG00000003650 ortholog_one2one 1 retrogene
retro_ttru_927,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_198 56.76 55.73
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2. retro_vpac_609 82.14 63.36
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Download FASTA sequences of all ENSVPAG00000003001 retrocopies