Parental gene:

Sephs1, ENSMUSG00000026662

Aliases:Sephs1, 1110046B24Rik, AA589574, AI505014, AW111620, SELD, SPS, SPS1
Description:selenophosphate synthetase 1 [Source:MGI Symbol;Acc:MGI:1923580]
Organism:Mouse (Mus musculus)
Coordinates:2:4881563..4910557(+)


>ENSMUSG00000026662
ATGTCTACTCGAGAGTCCTTTAACCCGGAGACTTATGAATTGGACAAGAGCTTCCGGCTAACCAGGTTTACTGAACTGAA
AGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTACAGAAACTGCTGGAATCTTTACAAGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCTGTTATGCCACGACTTGGCATTGGGATGGATACTTGCGTCATTCCTTTGAGGCATGGTGGTCTT
TCCTTGGTTCAGACCACAGATTACATTTATCCTATCGTCGACGACCCGTATATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGTGACCTTTATGCAATGGGTGTCACGGAGTGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACTG
ACCGGGAGAGGGATAAAGTGATACCGCTAATTATACAGGGTTTTAAAGATGCGGCAGAGGAAGCGGGAACCTCTGTAACA
GGCGGCCAAACGGTATTAAACCCCTGGATTGTTCTGGGAGGAGTCGCCACAACGGTCTGCCAGCCCAATGAATTTATCAT
GCCAGATAATGCAGTACCTGGGGATGTGCTGGTATTGACAAAGCCCCTGGGGACACAGGTTGCAGTTGCTGTGCACCAGT
GGCTGGATATTCCCGAAAAATGGAATAAAATTAAGCTAGTGGTCACCCAAGAAGACGTAGAGTTGGCATACCAAGAGGCA
ATGATGAACATGGCCCGGCTCAACAGGACAGCTGCAGGCCTCATGCACACGTTCAATGCTCATGCAGCCACTGACATCAC
CGGCTTCGGGATTCTGGGCCACGCGCAGAACCTGGCCAAGCAACAGAGGAACGAAGTGTCCTTCGTGATTCACAACCTTC
CTGTGCTGGCGAAGATGGCCGCTGTGAGCAAAGCCTGCGGAAACATGTTCGGCCTAATGCATGGGACCTGCCCAGAGACG
TCAGGAGGCCTGCTAATCTGTCTACCCCGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATCAAGTCCCCCAAATACGGCGA
AGGGCACCAAGCATGGATTATTGGGATAGTGGAGAAGGGCAACCGCACAGCCAGGATCATCGACAAGCCTCGGATTATTG
AAGTCGCACCTCAAGTAGCCACACAAAACGTGAACCCCACACCTGGTGCCACCTCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 23 .13 RPM
SRP007412_cerebellum 28 .79 RPM
SRP007412_heart 16 .28 RPM
SRP007412_kidney 34 .90 RPM
SRP007412_liver 31 .21 RPM
SRP007412_testis 10 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009494 ortholog_one2many 2 retrogenes
retro_cjac_166, retro_cjac_2219,
Dipodomys ordii ENSDORG00000014119 ortholog_one2one 1 retrogene
retro_dord_792,
Equus caballus ENSECAG00000014281 ortholog_one2one 1 retrogene
retro_ecab_77,
Homo sapiens ENSG00000086475 ortholog_one2one 3 retrogenes
retro_hsap_2196, retro_hsap_3860, retro_hsap_4705,
Macaca mulatta ENSMMUG00000021233 ortholog_one2one 4 retrogenes
retro_mmul_1607, retro_mmul_2495, retro_mmul_2647, retro_mmul_922,
Nomascus leucogenys ENSNLEG00000012205 ortholog_one2one 7 retrogenes
retro_nleu_1868, retro_nleu_2211, retro_nleu_234, retro_nleu_2668, retro_nleu_2873, retro_nleu_3004, retro_nleu_327,
Otolemur garnettii ENSOGAG00000007807 ortholog_one2one 1 retrogene
retro_ogar_3026,
Pan troglodytes ENSPTRG00000002303 ortholog_one2one 3 retrogenes
retro_ptro_1135, retro_ptro_1669, retro_ptro_3126,
Rattus norvegicus ENSRNOG00000018125 ortholog_one2one 1 retrogene
retro_rnor_59,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_248 79.76 84.44
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Download FASTA sequences of all ENSMUSG00000026662 retrocopies