Parental gene:

Trappc2, ENSMUSG00000079317

Aliases:None
Description:trafficking protein particle complex 2 [Source:MGI Symbol;Acc:MGI:1913476]
Organism:Mouse (Mus musculus)
Coordinates:X:166440573..166453140(+)


>ENSMUSG00000079317
ATGTCTGGGAGCTTCTACTTCGTAATTGTTGGCCACCATGATAATCCAGTTTTTGAAATGGAATTTTTGCCACCTGGGAA
AGCAGAATCCAAAGATGATCACCGTCATCTGAACCAGTTTATAGCTCATGCTGCTCTTGACCTTGTGGACGAAAATATGT
GGCTTTCGAACAACATGTACTTAAAAACGGTGGACAAATTTAATGAGTGGTTTGTATCAGCCTTTGTCACTGCAGGGCAT
ATGAGATTTATTATGCTTCATGATGTGAGGCAAGAAGATGGGATAAAGAACTTCTTTACTGATGTCTATGATCTGTATAT
AAAGTTTGCAATGAATCCATTTTATGAACCCAATTCTCCCATTCGATCGAGTGCATTCGACAGGAAAGTCCAGTTTCTTG
GGAAGAAACACCTTTTAAGCTAA

Library Parental gene expression (RPM)
SRP007412_brain 11 .12 RPM
SRP007412_cerebellum 7 .16 RPM
SRP007412_heart 2 .68 RPM
SRP007412_kidney 2 .66 RPM
SRP007412_liver 1 .20 RPM
SRP007412_testis 0 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001719 ortholog_many2many 1 retrogene
retro_acar_53,
Canis familiaris ENSCAFG00000011754 ortholog_one2many 2 retrogenes
retro_cfam_1608, retro_cfam_368,
Homo sapiens ENSG00000196459 ortholog_many2many 1 retrogene
retro_hsap_73,
Microcebus murinus ENSMICG00000004690 ortholog_one2many 1 retrogene
retro_mmur_1022,
Macaca mulatta ENSMMUG00000022619 ortholog_many2many 1 retrogene
retro_mmul_326,
Monodelphis domestica ENSMODG00000017312 ortholog_one2many 2 retrogenes
retro_mdom_1737, retro_mdom_1901,
Otolemur garnettii ENSOGAG00000002870 ortholog_many2many 2 retrogenes
retro_ogar_369, retro_ogar_60,
Pan troglodytes ENSPTRG00000021674 ortholog_many2many 1 retrogene
retro_ptro_72,
Sorex araneus ENSSARG00000006353 ortholog_one2many 1 retrogene
retro_sara_244,
Ictidomys tridecemlineatus ENSSTOG00000025097 ortholog_one2many 1 retrogene
retro_itri_1014,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_198 95.71 100.00
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2. retro_mmus_2522 93.57 100.00
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Download FASTA sequences of all ENSMUSG00000079317 retrocopies