Parental gene:

TRAPPC2, ENSPTRG00000021674

Aliases:None
Description:trafficking protein particle complex 2 [Source:HGNC Symbol;Acc:23068]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:13658157..13677630(-)


>ENSPTRG00000021674
ATGTCCTCTTGGAAGCAAGATCGCTCCGGGTTGAGATCCACAGAGCTAAACGTTTTAGAGTACCAACCATTGTGTGCTGT
GAGGAGCCATATATTGAAGACCATGTCTGGGAGCTTCTACTTTGTAATTGTTGGCCACCATGATAATCCAGTTTTTGAAA
TGGAGTTTTTGCCAGCTGGGAAGGCAGAATCCAAAGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTGCTCTC
GACCTCGTAGATGAGAACATGTGGCTATCGAACAACATGTACTTGAAAACTGTGGACAAGTTCAACGAGTGGTTTGTGTC
GGCATTTGTCACTGCGGGGCATATGAGGTTTATTATGCTTCATGACATAAGACAAGAAGATGGAATAAAGAACTTCTTTA
CTGATGTTTATGATTTATATATAAAGTTTTCAATGAATCCATTTTATGAACCCAATTCTCCTATTCGATCAAGTGCATTT
GACAGAAAAGTTCAGTTTCTTGGGAAGAAACACCTTTTAAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .57 RPM
SRP007412_cerebellum 4 .02 RPM
SRP007412_heart 0 .76 RPM
SRP007412_kidney 2 .30 RPM
SRP007412_liver 1 .21 RPM
SRP007412_testis 0 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001719 ortholog_many2many 1 retrogene
retro_acar_53,
Canis familiaris ENSCAFG00000011754 ortholog_one2many 2 retrogenes
retro_cfam_1608, retro_cfam_368,
Homo sapiens ENSG00000196459 ortholog_one2one 1 retrogene
retro_hsap_73,
Microcebus murinus ENSMICG00000004690 ortholog_one2many 1 retrogene
retro_mmur_1022,
Macaca mulatta ENSMMUG00000022619 possible_ortholog 1 retrogene
retro_mmul_326,
Monodelphis domestica ENSMODG00000017312 ortholog_one2many 2 retrogenes
retro_mdom_1737, retro_mdom_1901,
Mus musculus ENSMUSG00000079317 ortholog_many2many 2 retrogenes
retro_mmus_198, retro_mmus_2522,
Otolemur garnettii ENSOGAG00000002870 ortholog_many2many 2 retrogenes
retro_ogar_369, retro_ogar_60,
Sorex araneus ENSSARG00000006353 ortholog_one2many 1 retrogene
retro_sara_244,
Ictidomys tridecemlineatus ENSSTOG00000025097 ortholog_one2many 1 retrogene
retro_itri_1014,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_72 100.00 80.46
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Download FASTA sequences of all ENSPTRG00000021674 retrocopies