Parental gene:

C9ORF78, ENSNLEG00000017658

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397294.1:23963673..23972155(-)


>ENSNLEG00000017658
ATGCCGGTCGTCCGGAAGATTTTCCGTCGCCGCCGGGGCGACTCGGAGTCAGAGGAAGATGAGCAGGACTCAGAGGAGGT
TCGATTAAAACTGGAAGAGACCAGAGAGGTACAGAACTTGAGGAAGAGGCCCAACGGGGTGAGTGCTGTGGCCTTGCTGG
TGGGAGAGAAGGTACAAGAGGAGACCACTCTAGTGGATGATCCCTTTCAGATGAAGACAGGTGGTATGGTGGATATGAAG
AAACTGAAGGAAAGGGGCAAAGATAAGATCAGTGAGGAGGAGGATCTGCACCTGGGGACATCGTTTTCTGCAGAAACCAA
CCGAAGGGATGAGGATGCAGACATGATGAAGTACATTGAGACAGAGCTAAAGAAGAGGAAAGGGATCGTGGAACATGAGG
AACAGAAAGTGAAGCCAAAGAATGCAGAGGACTGTCTTTATGAACTTCCAGAAAACATCCGTGTTTCCTCAGCAAAGAAG
ACTGAGGAGATGCTTTCCAATCAGATGCTGAGTGGCATTCCTGAGGTGGACCTGGGCATCGATGCTAAAATAAAAAATAT
AATTTCCACGGAGGATGCCAAGGCCCGTCTGCTGGCAGAGCAGCAGAACAAGAAGAAAGACAGTGAGACCTCCTTCGTGC
CTACCAACATGGCTGTGAATTACGTGCAGCACAACAGATTTTATCATGAGGAGCTCAACGCGCCGATACGGAGAAACAAA
GAAGAGCCCAAGGCCCGGCCCTTGAGAGTAGGCGACACAGAGAAGCCAGAGCCTGAACGGTCCCCTCCTAACCGCAAGCG
TCCTGCTAACGAGAAGGCAACTGATGACTATCATTATGAGAAGTTCAAGAAAATGAATAGGCGGTACTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000019979 possible_ortholog 1 retrogene
retro_cfam_116,
Choloepus hoffmanni ENSCHOG00000013895 ortholog_one2one 3 retrogenes
retro_chof_1103, retro_chof_1747, retro_chof_978,
Callithrix jacchus ENSCJAG00000020318 ortholog_one2one 3 retrogenes
retro_cjac_1757, retro_cjac_2299, retro_cjac_2778,
Dasypus novemcinctus ENSDNOG00000019214 ortholog_one2one 1 retrogene
retro_dnov_1540,
Homo sapiens ENSG00000136819 ortholog_one2one 3 retrogenes
retro_hsap_2872, retro_hsap_2913, retro_hsap_320,
Gorilla gorilla ENSGGOG00000013358 ortholog_one2one 1 retrogene
retro_ggor_1990,
Macropus eugenii ENSMEUG00000010524 ortholog_one2many 3 retrogenes
retro_meug_1046, retro_meug_1241, retro_meug_508,
Macaca mulatta ENSMMUG00000003795 ortholog_one2one 2 retrogenes
retro_mmul_1460, retro_mmul_1870,
Monodelphis domestica ENSMODG00000006832 ortholog_one2one 1 retrogene
retro_mdom_518,
Otolemur garnettii ENSOGAG00000009770 ortholog_one2one 1 retrogene
retro_ogar_1015,
Pongo abelii ENSPPYG00000019685 ortholog_one2one 1 retrogene
retro_pabe_2426,
Pan troglodytes ENSPTRG00000021465 ortholog_one2one 3 retrogenes
retro_ptro_1943, retro_ptro_1969, retro_ptro_258,
Sarcophilus harrisii ENSSHAG00000012313 ortholog_one2one 1 retrogene
retro_shar_746,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_614 67.65 69.55
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2. retro_nleu_823 70.39 79.58
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3. retro_nleu_1763 53.85 79.58
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Download FASTA sequences of all ENSNLEG00000017658 retrocopies