Parental gene: | KRT5, ENSNLEG00000017746 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397261.1:59980682..59986771(+) |
>ENSNLEG00000017746
ATGTCTCGCCAGTCAAGTGTGTCCTTCCGGAGTGGGGGCAGTCGTGGCTTCAGCACCGCCTCTGCCATCACCCCATCTGT
CTCCCGCACCAGCTTCACCTCTGTGTCCCGGTCCGGGGGTGGCGGTGGTGGTGGCTTCGGCAGGGTCAGTCTTGGGGGTG
CTTGTGGAGTGGGTGGCTATGGCAGCCGGAGCCTCTACAATCTGGGGGGCTCCAAGAGGATATCCATCAGCACTAGTGGT
GGCAGCTTCAGGAACCGGTTTGCTGCTGGTGCTGGAGGTGGCTATGGCTTTGGAGGTGGTGCCGGTAGTGGATTTGGTTT
CGGCGGTGGAGCTGGCGGTGGCTTTGGGCTCGGTGGCGGAGCTGGCTTTGGAGGTGGCTTCGGTGGCCCTGGCTTTCCCG
TCTGCCCTCCTGGAGGTATCCAAGAGGTCACCGTCAACCAGAGTCTCCTGACTCCCCTCAACCTGCAAATCGACCCCAGC
ATCCAGAGGGTGAGGACTGAGGAGCGTGAGCAGATCAAGACCCTCAACAATAAGTTCGCCTCCTTCATCGACAAGGTGCG
GTTCCTGGAGCAGCAGAACAAGGTTCTGGACACCAAGTGGACCCTGCTGCAGGAGCAGGGCACCAAGACCGTGAGGCAGA
ACCTGGAGCCGTTGTTTGAGCAGTACATCAACAACCTCAGGAGGCAGCTGGACAGCATCGTGGGGGAACGGGGCCGCCTG
GACTCGGAGCTGAGAAACATGCAGGACCTGGTGGAAGACTTCAAGAACAAGTATGAGGATGAAATCAACAAGCGTACCAC
TGCTGAGAATGAGTTTGTGATGCTGAAGAAGGATGTGGACGCTGCCTACATGAACAAGGTGGAGCTGGAGGCCAAGGTTG
ATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGGAGCTGTCCCAGATGCAGACGCATGTCTCTGAC
ACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAGGTCAAGGCCCAGTATGA
GGAGATCGCCAACCGCAGCCGGACCGAAGCCGAGTCCTGGTATCAGACCAAGTATGAGGAGCTGCAGCAGACAGCTGGCC
GGCATGGTGATGACCTCCGCAACACCAAGCATGAGATCTCTGAGATGAACCGGATGATCCAGAGGCTGAGAGCCGAGATT
GACAATGTCAAGAAACAGTGCGCCAATCTGCAGAACGCCATTGCGGATGCCGAGCAGCGTGGGGAGCTGGCCCTCAAGGA
TGCCAGGAACAAGCTGGCTGAGCTGGAGGAGGCCCTGCAGAAGGCCAAGCAGGACATGGCCCGGCTGCTGCGTGAGTACC
AGGAGCTCATGAACACCAAGCTGGCCCTGGACGTGGAGATCGCTACTTACCGCAAGCTGCTGGAGGGCGAGGAGTGCAGA
CTCAGTGGAGAAGGAGTTGGACCAGTCAACATCTCTGTTGTCACAAGCAGCGTCTCCTCTGGATATGGCGGCGGCAGCGG
CTACAGCAGTGGCCTTGGTGGAGGTCTTGGTGGCGGCCTCGGTGGAGGTCTTGGCGGTGGTCTTGGCGGAGGTGGCAGTG
GAAGCTACTACTCCAGCAGCAGTGGGGGTGTTGGCCTAGGCAGTGGGCTCAGTGTGGGGGGCTCTGGCTTCAGTGCAGGC
AGCGGCCGAGGCCTGGGGGTGGGCTTTGGCAGTGGCGGGGGTAGCAGCTCCAGCGTCAAATTTGTCTCCACCACCTCCTC
CTCCCGGAAGAGCTTCAAGAGCTAA
ATGTCTCGCCAGTCAAGTGTGTCCTTCCGGAGTGGGGGCAGTCGTGGCTTCAGCACCGCCTCTGCCATCACCCCATCTGT
CTCCCGCACCAGCTTCACCTCTGTGTCCCGGTCCGGGGGTGGCGGTGGTGGTGGCTTCGGCAGGGTCAGTCTTGGGGGTG
CTTGTGGAGTGGGTGGCTATGGCAGCCGGAGCCTCTACAATCTGGGGGGCTCCAAGAGGATATCCATCAGCACTAGTGGT
GGCAGCTTCAGGAACCGGTTTGCTGCTGGTGCTGGAGGTGGCTATGGCTTTGGAGGTGGTGCCGGTAGTGGATTTGGTTT
CGGCGGTGGAGCTGGCGGTGGCTTTGGGCTCGGTGGCGGAGCTGGCTTTGGAGGTGGCTTCGGTGGCCCTGGCTTTCCCG
TCTGCCCTCCTGGAGGTATCCAAGAGGTCACCGTCAACCAGAGTCTCCTGACTCCCCTCAACCTGCAAATCGACCCCAGC
ATCCAGAGGGTGAGGACTGAGGAGCGTGAGCAGATCAAGACCCTCAACAATAAGTTCGCCTCCTTCATCGACAAGGTGCG
GTTCCTGGAGCAGCAGAACAAGGTTCTGGACACCAAGTGGACCCTGCTGCAGGAGCAGGGCACCAAGACCGTGAGGCAGA
ACCTGGAGCCGTTGTTTGAGCAGTACATCAACAACCTCAGGAGGCAGCTGGACAGCATCGTGGGGGAACGGGGCCGCCTG
GACTCGGAGCTGAGAAACATGCAGGACCTGGTGGAAGACTTCAAGAACAAGTATGAGGATGAAATCAACAAGCGTACCAC
TGCTGAGAATGAGTTTGTGATGCTGAAGAAGGATGTGGACGCTGCCTACATGAACAAGGTGGAGCTGGAGGCCAAGGTTG
ATGCACTGATGGATGAGATTAACTTCATGAAGATGTTCTTTGATGCGGAGCTGTCCCAGATGCAGACGCATGTCTCTGAC
ACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTGAGGTCAAGGCCCAGTATGA
GGAGATCGCCAACCGCAGCCGGACCGAAGCCGAGTCCTGGTATCAGACCAAGTATGAGGAGCTGCAGCAGACAGCTGGCC
GGCATGGTGATGACCTCCGCAACACCAAGCATGAGATCTCTGAGATGAACCGGATGATCCAGAGGCTGAGAGCCGAGATT
GACAATGTCAAGAAACAGTGCGCCAATCTGCAGAACGCCATTGCGGATGCCGAGCAGCGTGGGGAGCTGGCCCTCAAGGA
TGCCAGGAACAAGCTGGCTGAGCTGGAGGAGGCCCTGCAGAAGGCCAAGCAGGACATGGCCCGGCTGCTGCGTGAGTACC
AGGAGCTCATGAACACCAAGCTGGCCCTGGACGTGGAGATCGCTACTTACCGCAAGCTGCTGGAGGGCGAGGAGTGCAGA
CTCAGTGGAGAAGGAGTTGGACCAGTCAACATCTCTGTTGTCACAAGCAGCGTCTCCTCTGGATATGGCGGCGGCAGCGG
CTACAGCAGTGGCCTTGGTGGAGGTCTTGGTGGCGGCCTCGGTGGAGGTCTTGGCGGTGGTCTTGGCGGAGGTGGCAGTG
GAAGCTACTACTCCAGCAGCAGTGGGGGTGTTGGCCTAGGCAGTGGGCTCAGTGTGGGGGGCTCTGGCTTCAGTGCAGGC
AGCGGCCGAGGCCTGGGGGTGGGCTTTGGCAGTGGCGGGGGTAGCAGCTCCAGCGTCAAATTTGTCTCCACCACCTCCTC
CTCCCGGAAGAGCTTCAAGAGCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011913 | ortholog_one2one | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000009412 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007907 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017733 | other_paralog | 8 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017740 | other_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017748 | within_species_paralog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017753 | within_species_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017758 | other_paralog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026579 | other_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004548 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000011707 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_354 | 60.00 | 70.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_457 | 55.76 | 71.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_852 | 60.37 | 71.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_2270 | 58.25 | 65.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_2596 | 58.64 | 71.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000017746 retrocopies