Parental gene:

KRT5, ENSVPAG00000011707

Aliases:None
Description:keratin 5 [Source:HGNC Symbol;Acc:6442]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_3202:451..5516(-)


>ENSVPAG00000011707
ATGTCTCGCCAGTCAAGTGTGTCCTTCCGGAGCGGGGGCAGCCGTAGCTTCAGCACTGCCTCCGCCATCACCCCGTCTAT
CTCCCGCACCAGTTTCACCACAGTGTCCCGGTCCGGGGGCGGCGGCGGCGGCGGCTTTGGCAGGGTCAGCCTCGGGGGCG
CTTGCGGAGTGGGCGGCTTTGGCAGCCGGAGCCTCTACAACCTGGGGAGCTCCAAGAGGATCTCCTTCAGCGCTGGCGGT
GGGGGCTTCAGGAGCCGGTTCGGAGCTGGTGCTGGAGGCGGCTATGGCTTTGGAGGTGGAGCTGGGAGTGGATTTGGTTT
TGGCGGTGGAGCTGGTGGTGGCTTTGGGCTCGGTGGTGGCGCTGGCTTTGGAGGTGGCTTTGGTGGCCCTGGCTTCCCCG
TCTGTCCCCCTGGAGGCATCCAAGAAGTCACCGTCAACCAGAGTCTTCTGACTCCCCTCAACCTGCAAATCGACCCCGCC
ATCCAGCGGGTGAGGACCGAGGAGCGGGAGCAGATCAAGACCCTCAATAACAAGTTTGCCTCCTTCATCGACAAGGTGCG
GTTCCTGGAGCAGCAGAACAAGGTCCTGGACACCAAGTGGACCCTGCTGCAGGAACAGGGCACCAAGACCGTGAGGCAGA
ACCTGGAGCCTCTGTTTGAGCAGTACATCAACAACCTCAGGAGGCAGCTGGACGGTATCCTGGGGGAGAGAGGCCGCCTG
GACTCGGAGCTGAGGAACATGCAGGACCTGGTGGAGGACTTCAAGAACAAGTATGAGGATGAAATCAACAAGCGCACCAC
CGCCGAGAATGAGTTTGTGATGCTGAAAAAGGACGTGGACGCCGCCTACATGAACAAAGTGGAGCTAGAGGCCAAGGTCG
ATGCACTGATGGATGAGATCAACTTCATGAAGATGTTCTTTGACGCGGAGCTGTCCCAGATGCAGACGCATGTCTCAGAC
ACGTCCGTGGTCCTGTCCATGGACAACAACCGCTCCCTGGACCTGGACAGCATCATTGCTGAGGTCAAGGCCCAGTACGA
GGAGATCGCCAACCGCAGCCGGACAGAAGCCGAGTCCTGGTACCAGACCAAGTACGAGGAGCTGCAGCAGACAGCGGGCC
GGCACGGCGATGATCTCCGCAACACCAAGCATGAGATCTCCGAGATGAACCGGATGATCCAGAGGCTGAGAGCCGAGATC
GACAACGTCAAGAAGCAGTGCGCCAACCTGCAGAACGCCATCGCTGATGCCGAGCAGCGTGGGGAGCTGGCCCTCAAAGA
TGCCAGGAACAAGCTGGCCGAGCTGGAGGACGCCCTGCAGAAGGCCAAGCAGGACATGGCCCGGCTGCTGCGCGAGTACC
AGGAGCTCATGACCAAGCTTGCCCTGGACGTAGAGATCGCCACCTACCGCAAGCTGCTAGAGGCCGAGGAGTGCAGACTG
AGTGGAGAAGGTGTCGGACCGGTCAACATC

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011913 ortholog_one2one 4 retrogenes
retro_chof_1848, retro_chof_2381, retro_chof_2385, retro_chof_778,
Erinaceus europaeus ENSEEUG00000009412 ortholog_one2one 1 retrogene
retro_eeur_521,
Echinops telfairi ENSETEG00000007907 ortholog_one2one 1 retrogene
retro_etel_1586,
Nomascus leucogenys ENSNLEG00000017746 ortholog_one2one 5 retrogenes
retro_nleu_2270, retro_nleu_2596, retro_nleu_354, retro_nleu_457, retro_nleu_852,
Pongo abelii ENSPPYG00000004548 ortholog_one2one 1 retrogene
retro_pabe_1103,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_334 66.56 63.27
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2. retro_vpac_551 62.75 71.84
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3. retro_vpac_555 58.10 63.27
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Download FASTA sequences of all ENSVPAG00000011707 retrocopies