Parental gene: | KRT5, ENSVPAG00000011707 |
| Aliases: | None |
| Description: | keratin 5 [Source:HGNC Symbol;Acc:6442] |
| Organism: | Alpaca (Vicugna pacos) |
| Coordinates: | GeneScaffold_3202:451..5516(-) |
>ENSVPAG00000011707
ATGTCTCGCCAGTCAAGTGTGTCCTTCCGGAGCGGGGGCAGCCGTAGCTTCAGCACTGCCTCCGCCATCACCCCGTCTAT
CTCCCGCACCAGTTTCACCACAGTGTCCCGGTCCGGGGGCGGCGGCGGCGGCGGCTTTGGCAGGGTCAGCCTCGGGGGCG
CTTGCGGAGTGGGCGGCTTTGGCAGCCGGAGCCTCTACAACCTGGGGAGCTCCAAGAGGATCTCCTTCAGCGCTGGCGGT
GGGGGCTTCAGGAGCCGGTTCGGAGCTGGTGCTGGAGGCGGCTATGGCTTTGGAGGTGGAGCTGGGAGTGGATTTGGTTT
TGGCGGTGGAGCTGGTGGTGGCTTTGGGCTCGGTGGTGGCGCTGGCTTTGGAGGTGGCTTTGGTGGCCCTGGCTTCCCCG
TCTGTCCCCCTGGAGGCATCCAAGAAGTCACCGTCAACCAGAGTCTTCTGACTCCCCTCAACCTGCAAATCGACCCCGCC
ATCCAGCGGGTGAGGACCGAGGAGCGGGAGCAGATCAAGACCCTCAATAACAAGTTTGCCTCCTTCATCGACAAGGTGCG
GTTCCTGGAGCAGCAGAACAAGGTCCTGGACACCAAGTGGACCCTGCTGCAGGAACAGGGCACCAAGACCGTGAGGCAGA
ACCTGGAGCCTCTGTTTGAGCAGTACATCAACAACCTCAGGAGGCAGCTGGACGGTATCCTGGGGGAGAGAGGCCGCCTG
GACTCGGAGCTGAGGAACATGCAGGACCTGGTGGAGGACTTCAAGAACAAGTATGAGGATGAAATCAACAAGCGCACCAC
CGCCGAGAATGAGTTTGTGATGCTGAAAAAGGACGTGGACGCCGCCTACATGAACAAAGTGGAGCTAGAGGCCAAGGTCG
ATGCACTGATGGATGAGATCAACTTCATGAAGATGTTCTTTGACGCGGAGCTGTCCCAGATGCAGACGCATGTCTCAGAC
ACGTCCGTGGTCCTGTCCATGGACAACAACCGCTCCCTGGACCTGGACAGCATCATTGCTGAGGTCAAGGCCCAGTACGA
GGAGATCGCCAACCGCAGCCGGACAGAAGCCGAGTCCTGGTACCAGACCAAGTACGAGGAGCTGCAGCAGACAGCGGGCC
GGCACGGCGATGATCTCCGCAACACCAAGCATGAGATCTCCGAGATGAACCGGATGATCCAGAGGCTGAGAGCCGAGATC
GACAACGTCAAGAAGCAGTGCGCCAACCTGCAGAACGCCATCGCTGATGCCGAGCAGCGTGGGGAGCTGGCCCTCAAAGA
TGCCAGGAACAAGCTGGCCGAGCTGGAGGACGCCCTGCAGAAGGCCAAGCAGGACATGGCCCGGCTGCTGCGCGAGTACC
AGGAGCTCATGACCAAGCTTGCCCTGGACGTAGAGATCGCCACCTACCGCAAGCTGCTAGAGGCCGAGGAGTGCAGACTG
AGTGGAGAAGGTGTCGGACCGGTCAACATC
ATGTCTCGCCAGTCAAGTGTGTCCTTCCGGAGCGGGGGCAGCCGTAGCTTCAGCACTGCCTCCGCCATCACCCCGTCTAT
CTCCCGCACCAGTTTCACCACAGTGTCCCGGTCCGGGGGCGGCGGCGGCGGCGGCTTTGGCAGGGTCAGCCTCGGGGGCG
CTTGCGGAGTGGGCGGCTTTGGCAGCCGGAGCCTCTACAACCTGGGGAGCTCCAAGAGGATCTCCTTCAGCGCTGGCGGT
GGGGGCTTCAGGAGCCGGTTCGGAGCTGGTGCTGGAGGCGGCTATGGCTTTGGAGGTGGAGCTGGGAGTGGATTTGGTTT
TGGCGGTGGAGCTGGTGGTGGCTTTGGGCTCGGTGGTGGCGCTGGCTTTGGAGGTGGCTTTGGTGGCCCTGGCTTCCCCG
TCTGTCCCCCTGGAGGCATCCAAGAAGTCACCGTCAACCAGAGTCTTCTGACTCCCCTCAACCTGCAAATCGACCCCGCC
ATCCAGCGGGTGAGGACCGAGGAGCGGGAGCAGATCAAGACCCTCAATAACAAGTTTGCCTCCTTCATCGACAAGGTGCG
GTTCCTGGAGCAGCAGAACAAGGTCCTGGACACCAAGTGGACCCTGCTGCAGGAACAGGGCACCAAGACCGTGAGGCAGA
ACCTGGAGCCTCTGTTTGAGCAGTACATCAACAACCTCAGGAGGCAGCTGGACGGTATCCTGGGGGAGAGAGGCCGCCTG
GACTCGGAGCTGAGGAACATGCAGGACCTGGTGGAGGACTTCAAGAACAAGTATGAGGATGAAATCAACAAGCGCACCAC
CGCCGAGAATGAGTTTGTGATGCTGAAAAAGGACGTGGACGCCGCCTACATGAACAAAGTGGAGCTAGAGGCCAAGGTCG
ATGCACTGATGGATGAGATCAACTTCATGAAGATGTTCTTTGACGCGGAGCTGTCCCAGATGCAGACGCATGTCTCAGAC
ACGTCCGTGGTCCTGTCCATGGACAACAACCGCTCCCTGGACCTGGACAGCATCATTGCTGAGGTCAAGGCCCAGTACGA
GGAGATCGCCAACCGCAGCCGGACAGAAGCCGAGTCCTGGTACCAGACCAAGTACGAGGAGCTGCAGCAGACAGCGGGCC
GGCACGGCGATGATCTCCGCAACACCAAGCATGAGATCTCCGAGATGAACCGGATGATCCAGAGGCTGAGAGCCGAGATC
GACAACGTCAAGAAGCAGTGCGCCAACCTGCAGAACGCCATCGCTGATGCCGAGCAGCGTGGGGAGCTGGCCCTCAAAGA
TGCCAGGAACAAGCTGGCCGAGCTGGAGGACGCCCTGCAGAAGGCCAAGCAGGACATGGCCCGGCTGCTGCGCGAGTACC
AGGAGCTCATGACCAAGCTTGCCCTGGACGTAGAGATCGCCACCTACCGCAAGCTGCTAGAGGCCGAGGAGTGCAGACTG
AGTGGAGAAGGTGTCGGACCGGTCAACATC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011913 | ortholog_one2one | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000009412 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007907 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017746 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000004548 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_vpac_334 | 66.56 | 63.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_vpac_551 | 62.75 | 71.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_vpac_555 | 58.10 | 63.27 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSVPAG00000011707 retrocopies