Parental gene:

ENSOCUG00000000498

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:4396242..4419276(+)


>ENSOCUG00000000498
ATGTTGTCACAGGACAGTAATGATGACACTGAGGATGTTTCCCTGTTCGATACGGAAGAGGAGACAGTTAGTAGACCAAG
AAAATCCAAAATCAGACATCCAGTGGCATCATTTTTCCATTTGTTCTTTCGAGTCAGTGCAATTGTAGTCTATCTTCTCT
GTGAATTGCTCAGCAGCAGCTTTATTGCCTGTATGGTGACCATTATCTTGTTGTTGTCATGTGACTTTTGGGCAGTGAAG
AATGTCACAGGTAGACTGATGGTAGGCTTACGTTGGTGGAATCATATTGATGAAGATGGAAAGAGCCATTGGGTGTTTGA
GTCCAGGAAGACATCCTCTGAAGAAAATAAAACTGTTTCGGAAGCTGAATCCAGAATCTTTTGGTTAGGACTTATTGCCT
GTCCAGTGCTATGGGTGATATTTGCCTTCAGTGCTCTCTTCTCCTTCAGAGTCAAATGGCTGGCAGTGGTTATCATGGGT
GTGGTGCTGCAAGGTGCCAACTTGTATGGTTACATCAGGTGTAAAGTGGGCAGCAGAAAGAATTTAACCAACATGGCAAC
TTCGTATCTTGGAAAGCAATTTTTAAGACAAAACGCTGGAGGTGATCAGACTACCTGA

Library Parental gene expression (RPM)
SRP017611_brain 30 .52 RPM
SRP017611_kidney 44 .50 RPM
SRP017611_liver 15 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000005330 ortholog_one2one 1 retrogene
retro_cpor_184,
Dasypus novemcinctus ENSDNOG00000007609 ortholog_one2one 2 retrogenes
retro_dnov_1041, retro_dnov_1390,
Homo sapiens ENSG00000171928 ortholog_one2many 1 retrogene
retro_hsap_2278,
Homo sapiens ENSG00000175106 ortholog_one2many 1 retrogene
retro_hsap_1625,
Loxodonta africana ENSLAFG00000003854 ortholog_one2one 1 retrogene
retro_lafr_465,
Myotis lucifugus ENSMLUG00000002825 ortholog_one2one 1 retrogene
retro_mluc_1484,
Macaca mulatta ENSMMUG00000019203 ortholog_one2many 5 retrogenes
retro_mmul_1032, retro_mmul_2125, retro_mmul_278, retro_mmul_600, retro_mmul_748,
Nomascus leucogenys ENSNLEG00000014658 ortholog_one2many 2 retrogenes
retro_nleu_1961, retro_nleu_2008,
Otolemur garnettii ENSOGAG00000012225 ortholog_one2one 1 retrogene
retro_ogar_978,
Pan troglodytes ENSPTRG00000007790 ortholog_one2many 1 retrogene
retro_ptro_20,
Pan troglodytes ENSPTRG00000008796 ortholog_one2many 1 retrogene
retro_ptro_996,
Rattus norvegicus ENSRNOG00000050649 ortholog_one2one 1 retrogene
retro_rnor_636,
Ictidomys tridecemlineatus ENSSTOG00000000642 ortholog_one2one 6 retrogenes
retro_itri_1415, retro_itri_1841, retro_itri_310, retro_itri_473, retro_itri_711, retro_itri_782,
Tarsius syrichta ENSTSYG00000008082 ortholog_one2one 2 retrogenes
retro_tsyr_2000, retro_tsyr_530,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_759 67.24 55.12
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Download FASTA sequences of all ENSOCUG00000000498 retrocopies