Parental gene:

BNIP3L, ENSOCUG00000010542

Aliases:None
Description:BCL2/adenovirus E1B 19kDa interacting protein 3-like [Source:HGNC Symbol;Acc:1085]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:43306126..43327873(-)


>ENSOCUG00000010542
ATGTCGTCTCATTTAGTCGAGCCGCCGCCGCCCCTGCACAACAACAACAACAACTGCGAGGACGGTGACCAGCATCTGCC
CCCACCGACCGGCCTCAACAGTTCCTGGGTGGAGCTACCAATGAACAGCAGCAATGGCAATGATAATGGCAATGGGAAAA
ACGGGGGCCTGGAGCACGTGCCTTCCTCGTCCTCCATCCACAATGGAGACATGGAGAAGATTCTGTTGGATGCGCAGCAT
GAATCGGGACAGAGCAGCTCCAGAGGCAGCTCCCACTGCGACAGCCCTTCCCCGCAAGAAGATGGGCAGATCATGTTTGA
TGTGGAAATGCACACGAGCAGGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGTGGAAGGAGAGAAGGAAGTAGAGGCTT
TGAAGAAGAGTGCAGACTGGGTATCGGATTGGTCCAGTAGACCTGAAAACATTCCACCCAAGGAGTTCCACTTCCGGCAC
CCGAAACGTTCTGTGTCTTTAAGCATGAGGAAAAGCGGCGCCATGAAGAAAGGGGGCATTTTCTCTGCAGAGTTCCTGAA
GGTCTTCATCCCGTCTCTCTTCCTTTCCCACGTGCTGGCTTTGGGGCTGGGCATCTATATTGGAAAACGACTGAGTGCAC
CGTCTGCCAGCACCTACTGA

Library Parental gene expression (RPM)
SRP017611_brain 65 .73 RPM
SRP017611_kidney 67 .00 RPM
SRP017611_liver 38 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021307 ortholog_one2one 4 retrogenes
retro_btau_1148, retro_btau_1170, retro_btau_1790, retro_btau_449,
Choloepus hoffmanni ENSCHOG00000007732 ortholog_one2one 3 retrogenes
retro_chof_2356, retro_chof_2475, retro_chof_980,
Dasypus novemcinctus ENSDNOG00000016179 ortholog_one2one 1 retrogene
retro_dnov_2101,
Dipodomys ordii ENSDORG00000009336 ortholog_one2one 1 retrogene
retro_dord_169,
Erinaceus europaeus ENSEEUG00000006302 ortholog_one2one 1 retrogene
retro_eeur_269,
Echinops telfairi ENSETEG00000012037 ortholog_one2one 3 retrogenes
retro_etel_1178, retro_etel_1428, retro_etel_603,
Felis catus ENSFCAG00000030159 ortholog_one2one 2 retrogenes
retro_fcat_616, retro_fcat_944,
Macropus eugenii ENSMEUG00000011173 ortholog_one2one 1 retrogene
retro_meug_962,
Myotis lucifugus ENSMLUG00000014949 ortholog_one2one 1 retrogene
retro_mluc_2192,
Mustela putorius furo ENSMPUG00000000829 ortholog_one2many 1 retrogene
retro_mputfur_297,
Mus musculus ENSMUSG00000022051 ortholog_one2one 2 retrogenes
retro_mmus_482, retro_mmus_849,
Otolemur garnettii ENSOGAG00000003163 ortholog_one2one 2 retrogenes
retro_ogar_1039, retro_ogar_2651,
Ochotona princeps ENSOPRG00000016284 ortholog_one2one 1 retrogene
retro_opri_1105,
Rattus norvegicus ENSRNOG00000009820 ortholog_one2many 1 retrogene
retro_rnor_1183,
Sus scrofa ENSSSCG00000009658 ortholog_one2one 1 retrogene
retro_sscr_511,
Ictidomys tridecemlineatus ENSSTOG00000004029 ortholog_one2one 1 retrogene
retro_itri_1525,
Tupaia belangeri ENSTBEG00000006361 ortholog_one2one 2 retrogenes
retro_tbel_3371, retro_tbel_4006,
Tarsius syrichta ENSTSYG00000011036 ortholog_one2one 4 retrogenes
retro_tsyr_1182, retro_tsyr_1602, retro_tsyr_162, retro_tsyr_1997,
Tursiops truncatus ENSTTRG00000004862 ortholog_one2one 1 retrogene
retro_ttru_725,
Vicugna pacos ENSVPAG00000000509 ortholog_one2one 2 retrogenes
retro_vpac_349, retro_vpac_534,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1460 63.25 52.51
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Download FASTA sequences of all ENSOCUG00000010542 retrocopies