Parental gene:

VPS29, ENSOCUG00000011924

Aliases:None
Description:vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:14340]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:21:6682367..6796287(-)


>ENSOCUG00000011924
ATGGCTGGGCACAGATTGGTGTTGGTGCTAGGAGATCTGCACATCCCACACCGGTGCAACAGTTTGCCAGCTAAATTCAA
AAAACTCCTGGTGCCAGGAAAGATCCAGCATATTCTCTGCACTGGGAACCTTTGCACCAAAGAAAGCTATGATTACCTCA
AGACCCTGGCTGGCGACGTCCACATCGTGAGAGGGGACTTCGACGAGAATCTGAATTATCCAGAACAGAAAGTTGTGACT
GTTGGACAGTTCAAAATTGGTTTGATCCATGGACATCAGGTTATTCCGTGGGGAGACATGGCCAGCTTGGCTCTGTTGCA
GCGGCAGTTTGATGTGGACATTCTTATCTCAGGACACACACACAAATTTGAAGCATTTGAGCATGAAAATAAATTCTATA
TTAACCCAGGTTCTGCCACTGGGGCATATAATGCCTTGGAAACAAACATTATTCCTTCATTTGTATTGATGGATATCCAG
GCTTCTACAGTGGTCACTTATGTGTATCAACTAATTGGAGATGACGTGAAAGTAGAACGAATTGAATACAAAAAATCCTA
A

Library Parental gene expression (RPM)
SRP017611_brain 83 .78 RPM
SRP017611_kidney 47 .13 RPM
SRP017611_liver 16 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001891 possible_ortholog 1 retrogene
retro_acar_30,
Felis catus ENSFCAG00000004135 ortholog_one2one 2 retrogenes
retro_fcat_165, retro_fcat_848,
Loxodonta africana ENSLAFG00000006176 possible_ortholog 1 retrogene
retro_lafr_1115,
Tupaia belangeri ENSTBEG00000012756 ortholog_one2one 4 retrogenes
retro_tbel_1121, retro_tbel_2187, retro_tbel_330, retro_tbel_4424,
Tursiops truncatus ENSTTRG00000015090 ortholog_one2one 2 retrogenes
retro_ttru_1404, retro_ttru_1492,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1611 60.40 81.82
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Download FASTA sequences of all ENSOCUG00000011924 retrocopies