Parental gene: | IDH3G, ENSOCUG00000016554 |
| Aliases: | None |
| Description: | isocitrate dehydrogenase 3 (NAD+) gamma (IDH3G), nuclear gene encoding mitochondrial protein, mRNA [Source:RefSeq mRNA;Acc:NM_001171363] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018816:630597..637743(+) |
>ENSOCUG00000016554
ATGGCGCTGAAGTTGACGACGACTGCAGGTGCCGTCGCGAGGGCGGTGTTCAAGCCAGCCGTCCTCAGCCGTCCTTGGGA
GGTTCTAAGTACCCATGAGGCCCCCTGGAGGAGCATCTCCTCAGTAAGTACCGCCCATCCTCCATCTGCGAAATATGGCG
GGCGGCACACAGTGACTATGATCCCCGGGGACGGCATCGGGCCGGAGCTCATGCTGCACGTCAAGTCTGTGTTCAGGCAT
GCGTGCGTGCCAGTGGACTTTGAAGAGGTGCACGTGAGTTCCAACGCTGACGAGGAAGACATCCGCAACGCCATCATGGC
CATCCGTCGGAACCGCGTGGCCTTGAAAGGCAACATTGAAACCAACCACAACCTGCCACCATCTCACAAATCCCGAAACA
ACATCCTTCGCACCAGCCTGGACCTCTACGCCAACGTCATCCACTGCAAGAGCCTGCCAGGAGTGGTAACACGGCACAAG
GACATAGACATCCTCATCGTCCGGGAGAACACGGAGGGCGAGTACAGTAGCCTGGAGCACGAGAGTGTGGCAGGAGTGGT
GGAGAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGCTGAATATGCCTTCAAGCTGGCCCAGGAGAGTGGGC
GCAAGAAAGTGACAGCCGTGCACAAGGCCAACATCATGAAGCTGGGCGATGGGCTCTTCCTGCAGTGCTGCAGGGAGGTG
GCGGCCGGCTACCCCCAGATCGCTTTTGAGAGCATGATTGTGGACAACACCACGATGCAGCTGGTGTCCCGGCCCCAGCA
GTTCGACGTCATGGTGATGCCCAATCTCTACGGCAACATCGTCAACAACGTGTGTGCAGGGCTGGTCGGGGGCCCAGGCC
TCGTGGCTGGGGCCAACTATGGCCATGTGTATGCAGTGTTTGAGACGGCTACCAGGAACACAGGCAAGAGTATCGCCAAT
AAGAACATTGCCAACCCCACAGCCACGCTGCTGGCCAGCTGCATGATGCTGGACCACCTCAAGCTCCACACCTACGCCGC
CTCCATCCGCAAGGCTGTCTTGGCATCCATGCACAACGACAACATGCACACCCCGGACATCGGGGGCCAGGGCACCACCT
CGGAAGCCATCCAGGACATCATCCGCAACATCCGCATCATCAACGGCCGGGCTGTGGAGGCCTAG
ATGGCGCTGAAGTTGACGACGACTGCAGGTGCCGTCGCGAGGGCGGTGTTCAAGCCAGCCGTCCTCAGCCGTCCTTGGGA
GGTTCTAAGTACCCATGAGGCCCCCTGGAGGAGCATCTCCTCAGTAAGTACCGCCCATCCTCCATCTGCGAAATATGGCG
GGCGGCACACAGTGACTATGATCCCCGGGGACGGCATCGGGCCGGAGCTCATGCTGCACGTCAAGTCTGTGTTCAGGCAT
GCGTGCGTGCCAGTGGACTTTGAAGAGGTGCACGTGAGTTCCAACGCTGACGAGGAAGACATCCGCAACGCCATCATGGC
CATCCGTCGGAACCGCGTGGCCTTGAAAGGCAACATTGAAACCAACCACAACCTGCCACCATCTCACAAATCCCGAAACA
ACATCCTTCGCACCAGCCTGGACCTCTACGCCAACGTCATCCACTGCAAGAGCCTGCCAGGAGTGGTAACACGGCACAAG
GACATAGACATCCTCATCGTCCGGGAGAACACGGAGGGCGAGTACAGTAGCCTGGAGCACGAGAGTGTGGCAGGAGTGGT
GGAGAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGCTGAATATGCCTTCAAGCTGGCCCAGGAGAGTGGGC
GCAAGAAAGTGACAGCCGTGCACAAGGCCAACATCATGAAGCTGGGCGATGGGCTCTTCCTGCAGTGCTGCAGGGAGGTG
GCGGCCGGCTACCCCCAGATCGCTTTTGAGAGCATGATTGTGGACAACACCACGATGCAGCTGGTGTCCCGGCCCCAGCA
GTTCGACGTCATGGTGATGCCCAATCTCTACGGCAACATCGTCAACAACGTGTGTGCAGGGCTGGTCGGGGGCCCAGGCC
TCGTGGCTGGGGCCAACTATGGCCATGTGTATGCAGTGTTTGAGACGGCTACCAGGAACACAGGCAAGAGTATCGCCAAT
AAGAACATTGCCAACCCCACAGCCACGCTGCTGGCCAGCTGCATGATGCTGGACCACCTCAAGCTCCACACCTACGCCGC
CTCCATCCGCAAGGCTGTCTTGGCATCCATGCACAACGACAACATGCACACCCCGGACATCGGGGGCCAGGGCACCACCT
CGGAAGCCATCCAGGACATCATCCGCAACATCCGCATCATCAACGGCCGGGCTGTGGAGGCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 55 .03 RPM |
| SRP017611_kidney | 160 .85 RPM |
| SRP017611_brain | 141 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000006029 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000015625 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000007365 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013934 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004457 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000008973 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000024398 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_80 | 72.58 | 97.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000016554 retrocopies