Parental gene:

ENSOCUG00000016658

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:112359615..112515270(+)


>ENSOCUG00000016658
ATAGGCGGGGGCGGGAGAGAGGTGGGCTTGCCAGTGGTGAAGGGGCTGGAGGTGTTCCCTGTTCAGCTTCCTCTTCGCTG
TGCCCGTCGCACGTTTGCTTCACAGACTGAGGGGGAGCTCAGGGTGACCCAGATTCTCAGAGAGAAGTTTCCTCGAGCCA
CAGCTATCAAAGTCACCGACATCTCCGGGGGCTGTGGGGCCATGTACGAGATCAAAATCGAGTCGGAAGACTTCAAGGAG
AAGAGAACTGTCCAGCAGCACCAGATGGTTAATCAGGCGCTCAAAGAAGAAATCAAGGAGATGCACGGCTTGCGGATATT
CACCTCGGTCCCCAGACACTGA

Library Parental gene expression (RPM)
SRP017611_brain 8 .44 RPM
SRP017611_kidney 31 .32 RPM
SRP017611_liver 3 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008739 ortholog_one2many 1 retrogene
retro_cfam_1574,
Callithrix jacchus ENSCJAG00000017844 ortholog_many2many 1 retrogene
retro_cjac_1112,
Dasypus novemcinctus ENSDNOG00000008309 ortholog_one2many 2 retrogenes
retro_dnov_2474, retro_dnov_510,
Homo sapiens ENSG00000163170 ortholog_one2many 3 retrogenes
retro_hsap_1959, retro_hsap_3383, retro_hsap_4148,
Gorilla gorilla ENSGGOG00000024505 ortholog_one2many 4 retrogenes
retro_ggor_1423, retro_ggor_1424, retro_ggor_2290, retro_ggor_2786,
Myotis lucifugus ENSMLUG00000016364 ortholog_one2many 1 retrogene
retro_mluc_1407,
Macaca mulatta ENSMMUG00000015207 ortholog_one2many 2 retrogenes
retro_mmul_1181, retro_mmul_2109,
Mustela putorius furo ENSMPUG00000007813 ortholog_one2many 1 retrogene
retro_mputfur_1519,
Mus musculus ENSMUSG00000045160 ortholog_one2many 1 retrogene
retro_mmus_1648,
Nomascus leucogenys ENSNLEG00000000320 ortholog_one2many 4 retrogenes
retro_nleu_1391, retro_nleu_1567, retro_nleu_2604, retro_nleu_971,
Otolemur garnettii ENSOGAG00000003502 ortholog_one2many 1 retrogene
retro_ogar_1839,
Pongo abelii ENSPPYG00000012285 ortholog_one2many 2 retrogenes
retro_pabe_1618, retro_pabe_3461,
Pan troglodytes ENSPTRG00000012078 ortholog_one2many 3 retrogenes
retro_ptro_1309, retro_ptro_2299, retro_ptro_2820,
Sorex araneus ENSSARG00000001754 ortholog_one2many 1 retrogene
retro_sara_83,
Sus scrofa ENSSSCG00000008291 ortholog_one2many 1 retrogene
retro_sscr_750,
Tursiops truncatus ENSTTRG00000006698 ortholog_one2many 3 retrogenes
retro_ttru_1149, retro_ttru_1493, retro_ttru_254,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_51 91.11 79.65
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Download FASTA sequences of all ENSOCUG00000016658 retrocopies