Parental gene:

ENSOGAG00000009152

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873554.1:16563025..16564699(-)


>ENSOGAG00000009152
TGTGCTGTCCTGATTGTTGCCGCTGGTGTTGGTGAATTTGAAGCTGGTATTTCAAAGAATGGGCAGACCCGTGAGCATGC
CCTTCTGGCTTACACACTGGGTGTGAAGCAACTAATTGTTGGTGTTAACAAGATGGATTCCACTGAACCACCCTACAGCC
AGAAGAGATACGAGGAAATCGTTAAAGAAGTCAGCACTTACATTAAGAAAATTGGCTACAACCCTGACACAGTAGCATTT
GTGCCAATTTCTGGTTGGAATGGTGACAACATGTTGGAGCCAAGTGCAAACATGCCTTGGTTCAAGGGATGGAAAGTCAC
CCGGAAGGATGGCAATGCCAGTGGAACCACACTGCTTGAAGCTCTGGATTGCATTCTGCCACCAACTCGTCCAACTGACA
AGCCCTTGCGTCTGCCTCTGCAGGATGTCTACAAAATTGGTGGTATTGGTACTGTCCCTGTGGGCCGAGTGGAGACTGGG
GTTCTCAAACCCGGCATGGTGGTCACCTTTGCTCCAGTTAATGTTACAACTGAAGTAAAGTCTGTGGAAATGCACCATGA
AGCTTTGAGCGAAGCTCTTCCAGGAGACAACGTGGGCTTCAATGTCAAGAATGTGTCTGTCAAAGATGTTCGTCGTGGCA
ATGTTGCTGGTGATAGCAAAAATGACCCACCGATGGAAGCAGCTGGCTTCACTGCTCAGGTGATTATCCTGAACCATCCA
GGCCAAATTAGTGCTGGCTATGCTCCTGTACTGGATTGTCACACAGCTCACATTGCCTGCAAGTTTGCTGAGCTGAAGGA
AAAGATTGACCGCCGCTCTGGTAAAAAGCTGGAAGATGGCCCCAAATTCCTGAAATCTGGTGATGCTGCCATCGTCGATA
TGGTTCCTGGCAAACCCATGTGTGTTGAGAGCTTCTCAGATTATCCTCCTCTGGGTCGTTTTGCTGTTCGTGACATGAGA
CAGACGGTTGCTGTTGGTGTCATCAAAGCAGTGGACAAGAAGGCTGCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAA
AGCTCAGAAGGCTAAATGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013249 possible_ortholog 1 retrogene
retro_cfam_1007,
Dipodomys ordii ENSDORG00000009629 possible_ortholog 1 retrogene
retro_dord_509,
Equus caballus ENSECAG00000022260 possible_ortholog 1 retrogene
retro_ecab_802,
Erinaceus europaeus ENSEEUG00000000342 possible_ortholog 3 retrogenes
retro_eeur_407, retro_eeur_492, retro_eeur_625,
Echinops telfairi ENSETEG00000004236 ortholog_one2one 14 retrogenes
retro_etel_1189, retro_etel_1248, retro_etel_1260, retro_etel_1429, retro_etel_1436, retro_etel_1472, retro_etel_1578, retro_etel_1602, retro_etel_1682, retro_etel_1808, retro_etel_2135, retro_etel_366, retro_etel_411, retro_etel_830,
Loxodonta africana ENSLAFG00000028081 possible_ortholog 1 retrogene
retro_lafr_651,
Microcebus murinus ENSMICG00000015319 possible_ortholog 21 retrogenes
retro_mmur_1027, retro_mmur_1116, retro_mmur_1145, retro_mmur_1182, retro_mmur_1190, retro_mmur_12, retro_mmur_1282, retro_mmur_1316, retro_mmur_1339, retro_mmur_1343, retro_mmur_1350, retro_mmur_1568, retro_mmur_171, retro_mmur_26, retro_mmur_273, retro_mmur_49, retro_mmur_682, retro_mmur_729, retro_mmur_825, retro_mmur_877, retro_mmur_9,
Monodelphis domestica ENSMODG00000018533 possible_ortholog 4 retrogenes
retro_mdom_1053, retro_mdom_1146, retro_mdom_311, retro_mdom_792,
Mus musculus ENSMUSG00000037742 possible_ortholog 15 retrogenes
retro_mmus_1349, retro_mmus_1518, retro_mmus_1667, retro_mmus_1783, retro_mmus_1816, retro_mmus_1849, retro_mmus_1850, retro_mmus_1864, retro_mmus_1909, retro_mmus_2363, retro_mmus_2583, retro_mmus_2902, retro_mmus_3249, retro_mmus_480, retro_mmus_483,
Otolemur garnettii ENSOGAG00000004630 within_species_paralog 8 retrogenes
retro_ogar_1067, retro_ogar_2034, retro_ogar_2329, retro_ogar_2497, retro_ogar_2583, retro_ogar_3191, retro_ogar_3270, retro_ogar_643,
Pongo abelii ENSPPYG00000016777 possible_ortholog 1 retrogene
retro_pabe_12,
Ictidomys tridecemlineatus ENSSTOG00000007687 possible_ortholog 4 retrogenes
retro_itri_1509, retro_itri_1740, retro_itri_1816, retro_itri_195,
Tupaia belangeri ENSTBEG00000012151 ortholog_one2one 51 retrogenes
retro_tbel_1084, retro_tbel_1330, retro_tbel_1373, retro_tbel_1452, retro_tbel_166, retro_tbel_1841, retro_tbel_1969, retro_tbel_1994, retro_tbel_2088, retro_tbel_2091, retro_tbel_2179, retro_tbel_2205, retro_tbel_2206, retro_tbel_2218, retro_tbel_2232, retro_tbel_2419, retro_tbel_2505, retro_tbel_259, retro_tbel_2627, retro_tbel_2718, retro_tbel_2738, retro_tbel_2758, retro_tbel_282, retro_tbel_2976, retro_tbel_3032, retro_tbel_3065, retro_tbel_3067, retro_tbel_3281, retro_tbel_3307, retro_tbel_3315, retro_tbel_338, retro_tbel_354, retro_tbel_360, retro_tbel_372, retro_tbel_3813, retro_tbel_3865, retro_tbel_3967, retro_tbel_4125, retro_tbel_4192, retro_tbel_4282, retro_tbel_4352, retro_tbel_4370, retro_tbel_4466, retro_tbel_4496, retro_tbel_4639, retro_tbel_4660, retro_tbel_4695, retro_tbel_473, retro_tbel_588, retro_tbel_620, retro_tbel_903,
Drosophila melanogaster FBgn0000557 ortholog_many2many 1 retrogene
retro_dmel_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1215 75.36 78.69
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2. retro_ogar_1622 78.63 70.45
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3. retro_ogar_1779 94.38 70.74
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4. retro_ogar_1840 80.78 71.59
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5. retro_ogar_2281 77.53 50.28
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6. retro_ogar_2526 71.38 75.85
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7. retro_ogar_2557 81.70 62.78
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8. retro_ogar_3013 86.81 50.85
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9. retro_ogar_3046 73.76 74.15
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10. retro_ogar_3271 85.19 53.41
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Download FASTA sequences of all ENSOGAG00000009152 retrocopies