Parental gene:

EEF1A2, ENSOGAG00000004630

Aliases:None
Description:eukaryotic translation elongation factor 1 alpha 2 [Source:HGNC Symbol;Acc:3192]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873542.1:22202951..22211922(-)


>ENSOGAG00000004630
ATGGGCAAGGAGAAGACCCACATCAATATCGTGGTCATCGGCCATGTGGACTCAGGCAAGTCCACCACAACAGGCCACCT
CATCTACAAGTGCGGGGGCATCGACAAGAGGACCATTGAGAAGTTTGAGAAGGAGGCAGCTGAGATGGGGAAGGGGTCCT
TCAAATACGCCTGGGTGCTGGACAAACTGAAGGCTGAGCGCGAGCGTGGTATCACCATTGATATCTCCCTCTGGAAGTTT
GAGACCACCAAGTACTATATCACCATCATTGATGCCCCTGGCCACCGTGACTTTATCAAGAACATGATCACTGGCACATC
CCAGGCGGACTGTGCAGTGCTGATAGTGGCAGCAGGTGTGGGCGAATTCGAGGCTGGCATCTCCAAGAATGGGCAGACAC
GGGAGCACGCACTGCTGGCCTACACGCTGGGTGTGAAGCAGCTCATTGTGGGCGTGAACAAGATGGACTCCACGGAGCCT
GCGTACAGTGAGAAGCGCTACGACGAGATTGTCAAGGAGGTCAGCGCCTACATCAAGAAGATTGGCTACAACCCGGCCAC
AGTGCCCTTCGTGCCCATCTCAGGCTGGCATGGCGACAACATGTTGGAGCCCTCTCCCAATATGCCATGGTTCAAAGGCT
GGAAAGTGGAGCGCAAGGAAGGGAATGCAAGTGGTGTGTCCCTGCTTGAGGCACTGGACACCATCCTGCCCCCAACACGC
CCCACGGACAAGCCCCTGCGCCTGCCACTGCAGGATGTCTACAAAATTGGCGGCATTGGCACTGTGCCCGTGGGCAGAGT
AGAGACCGGCATCCTTCGGCCGGGCATGGTGGTGACTTTTGCACCTGTGAACATCACCACGGAAGTGAAGTCAGTGGAGA
TGCATCATGAGGCGTTGAGTGAAGCCCTGCCTGGCGACAACGTCGGCTTCAATGTGAAGAATGTGTCAGTCAAGGACATC
CGCCGGGGCAATGTGTGCGGGGACAGCAAGTCCGACCCACCACAGGAGGCCGCCCAGTTCACCTCCCAGGTCATCATCCT
GAACCACCCCGGGCAGATCAGTGCCGGCTACTCGCCAGTCATTGACTGCCACACGGCGCACATTGCCTGCAAGTTTGCGG
AGCTCAAGGAGAAGATTGACCGGCGTTCCGGCAAGAAACTGGAGGACAACCCCAAGTCCCTGAAGTCTGGTGATGCTGCC
ATCGTGGAGATGGTCCCGGGAAAGCCCATGTGTGTGGAGAGCTTCTCCCAGTATCCACCACTCGGCCGCTTCGCCGTGCG
TGACATGAGGCAGACGGTGGCCGTGGGCGTCATCAAGAACGTGGAGAAGAAGAGCGGCGGCGCTGGCAAGGTCACCAAGT
CGGCACAAAAGGCGCAGAAGGCGGGCAAGTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013249 possible_ortholog 1 retrogene
retro_cfam_1007,
Equus caballus ENSECAG00000022260 possible_ortholog 1 retrogene
retro_ecab_802,
Latimeria chalumnae ENSLACG00000002952 possible_ortholog 1 retrogene
retro_lcha_39,
Loxodonta africana ENSLAFG00000028081 possible_ortholog 1 retrogene
retro_lafr_651,
Macropus eugenii ENSMEUG00000005018 ortholog_one2one 23 retrogenes
retro_meug_1067, retro_meug_110, retro_meug_1160, retro_meug_1240, retro_meug_1334, retro_meug_135, retro_meug_1421, retro_meug_1451, retro_meug_1465, retro_meug_1501, retro_meug_1662, retro_meug_1690, retro_meug_1710, retro_meug_1829, retro_meug_2023, retro_meug_2044, retro_meug_2050, retro_meug_316, retro_meug_601, retro_meug_755, retro_meug_792, retro_meug_850, retro_meug_920,
Myotis lucifugus ENSMLUG00000016760 ortholog_one2one 1 retrogene
retro_mluc_1250,
Mustela putorius furo ENSMPUG00000008289 ortholog_one2one 3 retrogenes
retro_mputfur_1030, retro_mputfur_609, retro_mputfur_761,
Nomascus leucogenys ENSNLEG00000010060 ortholog_one2one 2 retrogenes
retro_nleu_11, retro_nleu_1489,
Ornithorhynchus anatinus ENSOANG00000004908 ortholog_one2one 1 retrogene
retro_oana_73,
Otolemur garnettii ENSOGAG00000009152 within_species_paralog 10 retrogenes
retro_ogar_1215, retro_ogar_1622, retro_ogar_1779, retro_ogar_1840, retro_ogar_2281, retro_ogar_2526, retro_ogar_2557, retro_ogar_3013, retro_ogar_3046, retro_ogar_3271,
Ictidomys tridecemlineatus ENSSTOG00000028862 ortholog_one2one 1 retrogene
retro_itri_1028,
Tursiops truncatus ENSTTRG00000001835 ortholog_one2one 1 retrogene
retro_ttru_993,
Drosophila melanogaster FBgn0000557 ortholog_many2many 1 retrogene
retro_dmel_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_643 71.43 58.10
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2. retro_ogar_1067 84.20 83.15
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3. retro_ogar_2034 71.53 59.83
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4. retro_ogar_2329 90.14 74.30
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5. retro_ogar_2497 87.45 99.57
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6. retro_ogar_2583 84.82 99.57
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7. retro_ogar_3191 87.47 99.57
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8. retro_ogar_3270 84.44 58.10
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Download FASTA sequences of all ENSOGAG00000004630 retrocopies