Parental gene: | CTSV, ENSOPRG00000001030 |
| Aliases: | None |
| Description: | cathepsin V [Source:HGNC Symbol;Acc:2538] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_2303:132563..136115(+) |
>ENSOPRG00000001030
ATGAAACCTTTGTTTCTCCTGGCTGCCGTTTGCTGGGGGATAGCCTTCGCTATTCCAACTTTTGATCAAATTGATACACA
ATGGTACCAGGGGAAAGCAACACACANNNNNNNNNNNNNNNNNAATGAAGAAGGATGGAGGAGAGCTGTGTGGGAGAAGA
ACAAGAAGATGATTGACCTTCACAATGGGGAGTACAGCCAAGGGAAGCATGGCTTCACCATGGCCATGAACGCCTACGGC
GACATGACCAATGAAGAATTCAGACAAGTGATGAATGGCTACCAAAACCAGAGACACAGGCAGGGGAAAATGTTTCACGA
ACCTCTGCTGCTTCAGACCCCCAAGTCTGTGGACTGGCGCGAGAAAGGCTATGTGACTCCCGTGAAGAATCAGGGTCAGT
GTGGTTCCTGTTGGGCTTTCAGTGCAACTGGCGCCCTGGAAGGCCAGATGTTCCGGAAAACTGGCAAACTGGTGTCCCTG
AGTGAGCAGAACCTTGTGGACTGTTCTAAATCCCAGGGCAATATGGGTTGTAACGGTGGCCTCATGGACAATGCCTTCGA
GTATGTGAAAGAGAACGGGGGCCTGGACTCCGAGGAATCCTACCCATATGAAGCTGTCGATGAAACGTGTAAGTACAGGC
CTGAATGCTCTGCTGCCAACGACACAGGCTTCGTGGACATCCAGCAGCATGAGAAGGCTCTCTTGAAAGCCGTGGCCACC
GTGGGGCCCATCTCTGCTGCTATTGACGCAGGCCACCCGTCCTTCCAGTTCTACAAATCAGGCATTTACTACGACAAAGA
ATGCAGCAGCAAGGAACTTGATCATGGTATTCTGGTGGTTGGCTACGGCTTTGAAGGAACACATCCAAACATCACTAAAT
ACTGGCTTGTGAAGAACAGCTGGGGTCCAGAATGGGGCATTGATGGCTACGTGAAGATGATCAGAGACAAAGACAACCAC
TGCGGGATTGCCTCGGCAGCCAGCTACCCCACTGTGTGA
ATGAAACCTTTGTTTCTCCTGGCTGCCGTTTGCTGGGGGATAGCCTTCGCTATTCCAACTTTTGATCAAATTGATACACA
ATGGTACCAGGGGAAAGCAACACACANNNNNNNNNNNNNNNNNAATGAAGAAGGATGGAGGAGAGCTGTGTGGGAGAAGA
ACAAGAAGATGATTGACCTTCACAATGGGGAGTACAGCCAAGGGAAGCATGGCTTCACCATGGCCATGAACGCCTACGGC
GACATGACCAATGAAGAATTCAGACAAGTGATGAATGGCTACCAAAACCAGAGACACAGGCAGGGGAAAATGTTTCACGA
ACCTCTGCTGCTTCAGACCCCCAAGTCTGTGGACTGGCGCGAGAAAGGCTATGTGACTCCCGTGAAGAATCAGGGTCAGT
GTGGTTCCTGTTGGGCTTTCAGTGCAACTGGCGCCCTGGAAGGCCAGATGTTCCGGAAAACTGGCAAACTGGTGTCCCTG
AGTGAGCAGAACCTTGTGGACTGTTCTAAATCCCAGGGCAATATGGGTTGTAACGGTGGCCTCATGGACAATGCCTTCGA
GTATGTGAAAGAGAACGGGGGCCTGGACTCCGAGGAATCCTACCCATATGAAGCTGTCGATGAAACGTGTAAGTACAGGC
CTGAATGCTCTGCTGCCAACGACACAGGCTTCGTGGACATCCAGCAGCATGAGAAGGCTCTCTTGAAAGCCGTGGCCACC
GTGGGGCCCATCTCTGCTGCTATTGACGCAGGCCACCCGTCCTTCCAGTTCTACAAATCAGGCATTTACTACGACAAAGA
ATGCAGCAGCAAGGAACTTGATCATGGTATTCTGGTGGTTGGCTACGGCTTTGAAGGAACACATCCAAACATCACTAAAT
ACTGGCTTGTGAAGAACAGCTGGGGTCCAGAATGGGGCATTGATGGCTACGTGAAGATGATCAGAGACAAAGACAACCAC
TGCGGGATTGCCTCGGCAGCCAGCTACCCCACTGTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007548 | ortholog_one2one | 8 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000012037 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002168 | ortholog_many2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000014293 | ortholog_many2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016209 | ortholog_many2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000002844 | ortholog_one2many | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000003453 | ortholog_many2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016406 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_186 | 84.88 | 96.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_499 | 84.88 | 96.99 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000001030 retrocopies