Parental gene:

ENSMODG00000002844

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:6:16648098..16908910(+)


>ENSMODG00000002844
ATGAATTTCTACCTGTGTTTAGCTTCCCTGTGCTTGGGACTAGCGGCTGCCATTCCACCATTTGACAGGGCTTTAGATTC
TCAGTGGCACCAATGGAAGGCACAACATGGGAAGTCCTATGCAGCGAATGAAGACAGTTGGAGGAGAGCAACATGGGAGA
AGAATTTGAAAATGATTGAAAGGCACAATCAGGAGTACAGTGCTGGCAAACATAGTTTCCAGCTGAGAATGAACAAGTTT
GGCGACATGACCACTGAAGAATTCCAAGAAGCGATAAATTTCTATAACTCTAGTGCATCACAGAGGAGGACCAAAAGATA
TCTGCATCGTGAACCTCTCCTTGCACAGCTCCCTGAATCTGTAGATTGGAGAGAGGAAGGCTATGTAACTCCTGTTAAGA
ATCAGGGTCAGTGTTTGTCTTGTTGGGCGTTTAGCGCTGTTGGCGCCATTGAAGGTCAGTGGTTCCGTAAAACAGGCGAA
CTTGTTTCACTTAGTATACAGAACTTGGTTGACTGCACTACTTCTGATAGCATCAGTAGCTGCCATGGTGGTTTCATGGA
CAGAGCCTTCCAATATGTGCAGGACAATGGCGGCATTGATACAGAGGAGTGCTATCCTTATGTTGGAGAGGTTAACGAAT
GCAAATACCAACCAGAATGCTCTGGTGCTAATGTCGTTGGATTTGTAGACATTCCATCTATGGATGAAAGAGCACTCATG
GAGGCTGTAGCAACTGTGGGTCCCATCTCAGTTGCTATTGATGGAGGAAATCCATCCTTCAAGTTCTATGAGTCTGGTGT
TTATTATGAACCAGACTGCAGCAGTTCCCAACTGGATCATGGTGTGCTGGTTGTGGGCTATGGTTCAATAGGAAAAGATG
AATACTGGATTGTCAAGAACAGCTGGGGTGAAGAATGGGGCAAAAAAGGATACGTGTTAATGGCCAAGTTCAGGAATAAC
CACTGTGGAATAGCAACAGCAGCCAGCTACCCTCAAGTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001149 ortholog_one2many 1 retrogene
retro_cfam_43,
Choloepus hoffmanni ENSCHOG00000007548 ortholog_one2one 8 retrogenes
retro_chof_1227, retro_chof_1332, retro_chof_1345, retro_chof_141, retro_chof_1464, retro_chof_2392, retro_chof_383, retro_chof_424,
Dasypus novemcinctus ENSDNOG00000012037 ortholog_one2many 1 retrogene
retro_dnov_2387,
Dipodomys ordii ENSDORG00000019810 ortholog_one2many 1 retrogene
retro_dord_197,
Echinops telfairi ENSETEG00000007977 ortholog_one2many 1 retrogene
retro_etel_1465,
Macropus eugenii ENSMEUG00000002168 ortholog_one2many 2 retrogenes
retro_meug_1349, retro_meug_1567,
Macropus eugenii ENSMEUG00000014293 ortholog_one2many 1 retrogene
retro_meug_1873,
Macropus eugenii ENSMEUG00000016209 ortholog_one2many 2 retrogenes
retro_meug_159, retro_meug_1727,
Myotis lucifugus ENSMLUG00000003975 ortholog_one2many 1 retrogene
retro_mluc_2231,
Myotis lucifugus ENSMLUG00000025440 ortholog_one2many 1 retrogene
retro_mluc_2399,
Macaca mulatta ENSMMUG00000013861 ortholog_one2many 1 retrogene
retro_mmul_1669,
Monodelphis domestica ENSMODG00000012029 other_paralog 6 retrogenes
retro_mdom_1066, retro_mdom_1067, retro_mdom_1199, retro_mdom_1707, retro_mdom_1973, retro_mdom_1985,
Monodelphis domestica ENSMODG00000016601 other_paralog 1 retrogene
retro_mdom_1021,
Otolemur garnettii ENSOGAG00000001349 ortholog_one2many 2 retrogenes
retro_ogar_1053, retro_ogar_1373,
Ochotona princeps ENSOPRG00000001030 ortholog_one2many 2 retrogenes
retro_opri_186, retro_opri_499,
Petromyzon marinus ENSPMAG00000003453 ortholog_one2many 1 retrogene
retro_pmar_7,
Tupaia belangeri ENSTBEG00000016406 ortholog_one2many 1 retrogene
retro_tbel_2841,
Tarsius syrichta ENSTSYG00000002858 ortholog_one2many 2 retrogenes
retro_tsyr_150, retro_tsyr_603,
Vicugna pacos ENSVPAG00000004397 ortholog_one2many 1 retrogene
retro_vpac_433,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1101 62.15 52.55
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Download FASTA sequences of all ENSMODG00000002844 retrocopies