Parental gene: | IFT20, ENSOPRG00000005826 |
| Aliases: | None |
| Description: | intraflagellar transport 20 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:30989] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_579:269812..272536(-) |
>ENSOPRG00000005826
GCGACACGCTTCCTACCGACTGCCACTGTCACGCTTGCACAGAGCTTCTCTAGGCTTGGAAGGGAAGCAGCTATGGCCAA
GGATGTCCTGGGGGAGGCGGGGCTGCACTTCGACGAGCTCAACAAGCTGCGTGTGTTGGACCCGGAGGTTATGCAGCAGA
CCACAGAGCTCAAGGAGGAGTGCAAGGACTTTGTGGGCAAGATTGGCCAGTTTCAGAAAATAGTTGGTGGTCTAATTGAG
CTAGTGGACCAACTTGCAAAGGAAGCTGAAAATGAGAAGATGAAGGCCATTGGCTCTCGGAACTTGCTCAAATCTATAGC
AAAACAACGAGAAGCCCAGCAGCAGCAACTCCAGGCTCTCATAGCAGAGAAGAAGATGCAGCTGGAGAGGTATCGTGTTG
AATACGAAGCTTTGTGTAAAGTAGAAGCAGAACAAAATGAATTTATCGACCAATTTATTTTTCAGAAA
GCGACACGCTTCCTACCGACTGCCACTGTCACGCTTGCACAGAGCTTCTCTAGGCTTGGAAGGGAAGCAGCTATGGCCAA
GGATGTCCTGGGGGAGGCGGGGCTGCACTTCGACGAGCTCAACAAGCTGCGTGTGTTGGACCCGGAGGTTATGCAGCAGA
CCACAGAGCTCAAGGAGGAGTGCAAGGACTTTGTGGGCAAGATTGGCCAGTTTCAGAAAATAGTTGGTGGTCTAATTGAG
CTAGTGGACCAACTTGCAAAGGAAGCTGAAAATGAGAAGATGAAGGCCATTGGCTCTCGGAACTTGCTCAAATCTATAGC
AAAACAACGAGAAGCCCAGCAGCAGCAACTCCAGGCTCTCATAGCAGAGAAGAAGATGCAGCTGGAGAGGTATCGTGTTG
AATACGAAGCTTTGTGTAAAGTAGAAGCAGAACAAAATGAATTTATCGACCAATTTATTTTTCAGAAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005111 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000008110 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012534 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000003153 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018843 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000109083 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004568 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000005074 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008709 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000019143 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000019233 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000014353 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000001105 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001883 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007773 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003333 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008087 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000008911 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000023719 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007554 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005557 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_110 | 58.88 | 68.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_205 | 56.10 | 76.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_293 | 95.87 | 77.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_375 | 95.87 | 77.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_opri_872 | 56.10 | 76.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_opri_1185 | 58.88 | 68.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000005826 retrocopies