Parental gene: | ENSOPRG00000015394 |
| Aliases: | None |
| Description: | None |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_1455:139926..144980(-) |
>ENSOPRG00000015394
GTGAAAGAGCTTGTCTTGGACAACTGTCGGTCGATTGAAGGCAAAATCGAAGGCCTGACAGATGAATTTGAAGAACTGGA
ATTCTTGAGTACAATCAACGTCGGCCTCACCTCAGTCGCAAACTTACCAAAGTTAAACAAACTCAAGAAGCTTGAACTAA
GTGATAACAGAATCTCAGGGGGCCTGGAAGTATTGGCAGAAAAGTGTCCGAACCTTACGCATCTAAACTTAAGCGGCAAC
AAAATTAAAGACCTCAGCACGATAGAGCCCCTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGCGAGGT
GACCAACCTGAACGACTACCGGGAAAACGTGTTCGAGCTCCTCCCGCAGCTCACGTACCTCGATGGCTATGACCGGGATG
ACAAGGAGGCCTCCGACTCGGATGCCGAGGGCTACGTGGAGGGCCTGGACGACGACGAGGAGGAGGAGGACGAAGAGTTG
TTTGATGAAGACGCTCAGGTAGTGGAAGACGAGGAGGACGAGGACGAGGAGGAGGAGGGCGAAGAGGAGGACGTGAGTGG
AGAGGAGGAGGAGGATGAGGAAGGTTACAACGATGGGGAAGTGGATGAGGAGGAAGAGGAAGATGCTGGTGAGGAAGAAA
GGGGTCAGAAGCGGAAACGAGACCCCGAAGACGAAGGGGAAGAGGACGACTGA
GTGAAAGAGCTTGTCTTGGACAACTGTCGGTCGATTGAAGGCAAAATCGAAGGCCTGACAGATGAATTTGAAGAACTGGA
ATTCTTGAGTACAATCAACGTCGGCCTCACCTCAGTCGCAAACTTACCAAAGTTAAACAAACTCAAGAAGCTTGAACTAA
GTGATAACAGAATCTCAGGGGGCCTGGAAGTATTGGCAGAAAAGTGTCCGAACCTTACGCATCTAAACTTAAGCGGCAAC
AAAATTAAAGACCTCAGCACGATAGAGCCCCTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGCGAGGT
GACCAACCTGAACGACTACCGGGAAAACGTGTTCGAGCTCCTCCCGCAGCTCACGTACCTCGATGGCTATGACCGGGATG
ACAAGGAGGCCTCCGACTCGGATGCCGAGGGCTACGTGGAGGGCCTGGACGACGACGAGGAGGAGGAGGACGAAGAGTTG
TTTGATGAAGACGCTCAGGTAGTGGAAGACGAGGAGGACGAGGACGAGGAGGAGGAGGGCGAAGAGGAGGACGTGAGTGG
AGAGGAGGAGGAGGATGAGGAAGGTTACAACGATGGGGAAGTGGATGAGGAGGAAGAGGAAGATGCTGGTGAGGAAGAAA
GGGGTCAGAAGCGGAAACGAGACCCCGAAGACGAAGGGGAAGAGGACGACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002339 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000140350 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015417 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013347 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003058 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000010058 | within_species_paralog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000006595 | possible_ortholog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007219 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000045651 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010906 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_302 | 73.43 | 62.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_563 | 73.43 | 62.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000015394 retrocopies