Parental gene:

ENSSHAG00000010906

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834488.1:766626..815642(-)


>ENSSHAG00000010906
ATGGAGAAACGGATTCGTTTAGAGCTGCGGAACAGGAAGCCCTCCGATGTGAAAGAGCTCGTCCTGGACAACTGTCGGTC
ATATGATGGTAAAATTGAAGGCCTCACAGATGAATTTGAAGAACTGGAGTTCTTAAGTACAATCAACGTAGGCCTCTCCT
CAGTTGCAAACTTACCAAAGTTAAATAAACTTAAGAAGCTTGAACTAAGTGATAACAGAATCTCCGGAGGACTGGAAGTA
TTGGCAGAAAAGTGCCCGAACCTCACACATCTAAATCTAAGCGGAAACAAAATTAAAGACCTCAGTACAATAGACCCACT
GAAAAAGTTAGAAAACCTCAAAAGCTTAGATCTTTTTAATTGTGAGGTAACTAACTTGAATGACTACAGAGAAAATGTAT
TCAAACTCCTCCCCCAACTCACATACCTTGATGGCTATGACCGGGATGAGAAGGAGGCCCCTGACTCGGACGTCGAGGGC
TACGTGGAGGGACTGGAAGATGATGAGGAAGATGAGGACGAGGAGGAATATGACGAAGATGCCCAAGTAGTGGAGGATGA
AGAAGATGATGATGAGGAAGAGGAAGGAGAAGAGGAAGATGTCAGTGGAGAAGAAGAGGAGGATGAGGAAGGTTACAACG
ATGGGGAAGTAGATGATGAAGAAGATGAAGACGAAGTTGGTGGAGAAGAAAAGGGACAAAAGAGAAAACGAGAACCCGAA
GATGGGGGAGATGAAGATGACTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002339 ortholog_one2many 2 retrogenes
retro_cjac_3305, retro_cjac_3799,
Dasypus novemcinctus ENSDNOG00000015360 ortholog_one2one 5 retrogenes
retro_dnov_1199, retro_dnov_1250, retro_dnov_1696, retro_dnov_836, retro_dnov_956,
Dipodomys ordii ENSDORG00000008611 ortholog_one2one 1 retrogene
retro_dord_240,
Felis catus ENSFCAG00000015773 ortholog_one2one 1 retrogene
retro_fcat_1188,
Homo sapiens ENSG00000140350 ortholog_one2many 3 retrogenes
retro_hsap_1479, retro_hsap_3117, retro_hsap_48,
Gorilla gorilla ENSGGOG00000015417 ortholog_one2many 1 retrogene
retro_ggor_1134,
Loxodonta africana ENSLAFG00000022560 ortholog_one2one 1 retrogene
retro_lafr_679,
Macaca mulatta ENSMMUG00000022717 ortholog_one2one 1 retrogene
retro_mmul_1985,
Nomascus leucogenys ENSNLEG00000013347 ortholog_one2many 2 retrogenes
retro_nleu_15, retro_nleu_2383,
Otolemur garnettii ENSOGAG00000003058 ortholog_one2one 1 retrogene
retro_ogar_2596,
Ochotona princeps ENSOPRG00000015394 ortholog_one2one 2 retrogenes
retro_opri_302, retro_opri_563,
Pongo abelii ENSPPYG00000006595 ortholog_one2many 2 retrogenes
retro_pabe_210, retro_pabe_2575,
Pan troglodytes ENSPTRG00000007219 ortholog_one2many 2 retrogenes
retro_ptro_2108, retro_ptro_758,
Rattus norvegicus ENSRNOG00000045651 ortholog_one2many 1 retrogene
retro_rnor_1043,
Tupaia belangeri ENSTBEG00000016417 ortholog_one2one 2 retrogenes
retro_tbel_4078, retro_tbel_4595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_540 86.86 54.66
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Download FASTA sequences of all ENSSHAG00000010906 retrocopies