Parental gene: | ANP32A, ENSPPYG00000006595 |
| Aliases: | None |
| Description: | acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:HGNC Symbol;Acc:13233] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 15:65976994..66019101(-) |
>ENSPPYG00000006595
GAAATCAGGGCCTGTGGATGGAAGTTCCAGGGAGGGAGGCAACAAATCCACTTGACATTGGTGAAAGAACTTGTCCTGGA
CAACAGTCGGTCAAATGAAGGCAAACTCGAAGGCCTCACAGATGAATTTGAAGAACTGGAATTCTTAAGTACAATCAACG
TAGGCCTCACCTCAATCGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGCGATAACAGAGTCTCAGGG
GGCCTGGAAGTATTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAATTTAAGTGGCAACAAAATTAAAGACCTCAGCAC
AATAGAGCCACTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGCGAGGTAACCAACCTGAACGACTACC
GAGAAAATGTGTTCAAGCTCCTCCCGCAACTCACATATCTCGACGGCTATGACCGGGACGACAAGGAGGCCCCTGACTCG
GATGCTGAGGGCTATGTGGAGGGCCTGGATGATGAGGAGGAGGATGAGGACGAGGAGGAGTACGATGAAGATGCTCAGGT
AGTGGAAGACGAGGAGGACGAGGATGAGGAGGAGGAAGGTGAAGAGGAGGACGTGAGTGGAGAGGAGGAGGAGGATGAAG
AAGGTTATAACGATGGAGAGGTAGATGACGAGGAAGATGAAGAAGAGCTTGGTGAAGAAGAAAGGGGTCAGAAGCGAAAA
CGAGAACCTGAAGATGAGGGAGAAGATGATGACTAA
GAAATCAGGGCCTGTGGATGGAAGTTCCAGGGAGGGAGGCAACAAATCCACTTGACATTGGTGAAAGAACTTGTCCTGGA
CAACAGTCGGTCAAATGAAGGCAAACTCGAAGGCCTCACAGATGAATTTGAAGAACTGGAATTCTTAAGTACAATCAACG
TAGGCCTCACCTCAATCGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGCGATAACAGAGTCTCAGGG
GGCCTGGAAGTATTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAATTTAAGTGGCAACAAAATTAAAGACCTCAGCAC
AATAGAGCCACTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGCGAGGTAACCAACCTGAACGACTACC
GAGAAAATGTGTTCAAGCTCCTCCCGCAACTCACATATCTCGACGGCTATGACCGGGACGACAAGGAGGCCCCTGACTCG
GATGCTGAGGGCTATGTGGAGGGCCTGGATGATGAGGAGGAGGATGAGGACGAGGAGGAGTACGATGAAGATGCTCAGGT
AGTGGAAGACGAGGAGGACGAGGATGAGGAGGAGGAAGGTGAAGAGGAGGACGTGAGTGGAGAGGAGGAGGAGGATGAAG
AAGGTTATAACGATGGAGAGGTAGATGACGAGGAAGATGAAGAAGAGCTTGGTGAAGAAGAAAGGGGTCAGAAGCGAAAA
CGAGAACCTGAAGATGAGGGAGAAGATGATGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 94 .49 RPM |
| SRP007412_cerebellum | 140 .69 RPM |
| SRP007412_heart | 86 .16 RPM |
| SRP007412_kidney | 107 .89 RPM |
| SRP007412_liver | 71 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002339 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000015360 | possible_ortholog | 5 retrogenes | |
| Dipodomys ordii | ENSDORG00000008611 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000015773 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000022560 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022717 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003058 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000015394 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000019430 | within_species_paralog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000045651 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010906 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016417 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_210 | 93.80 | 52.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2575 | 89.13 | 74.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000006595 retrocopies