Parental gene:

ENSPCAG00000008816

Aliases:None
Description:None
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_972:6451..27822(-)


>ENSPCAG00000008816
GTGCGCAGGCAAGGCGCGGAGAGACGAGGCAGAGCGGAGGCACCGCCGCCAGGTCGCTCCGCTTCCACGCCGCCGGTCGC
TCCGCCCGCCGCGTCCGTCGCCGCCGCTGCCATGGGAGTGCAGGTGGAGACCATCTCCCCCGGAGACGGGCGCACCTTCC
CGAAGCGCGGCCAGACCTGCGTCGTGCACTACACGGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCCCGGGACAGA
AACAAGCCCTTTAAATTTATGCTAGGCAAGCAGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCGCAGATGAGTGTGGG
TCAGAGGGCCAAACTGACTATCTCCCCAGACTATGCCTATGGTGCCACTGGGCACCCTGGCATCATCCCACCAAATGCCA
CTCTCGTCTTTGATGTGGAACTTCTAAAACTGGAATGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008303 ortholog_one2many 4 retrogenes
retro_btau_1220, retro_btau_1265, retro_btau_128, retro_btau_1760,
Ciona savignyi ENSCSAVG00000006859 ortholog_many2many 1 retrogene
retro_csav_11,
Dasypus novemcinctus ENSDNOG00000005868 ortholog_one2one 16 retrogenes
retro_dnov_1289, retro_dnov_1577, retro_dnov_1666, retro_dnov_2236, retro_dnov_228, retro_dnov_2404, retro_dnov_2418, retro_dnov_2544, retro_dnov_2589, retro_dnov_263, retro_dnov_584, retro_dnov_621, retro_dnov_670, retro_dnov_684, retro_dnov_707, retro_dnov_937,
Homo sapiens ENSG00000088832 possible_ortholog 1 retrogene
retro_hsap_1198,
Gorilla gorilla ENSGGOG00000001729 possible_ortholog 3 retrogenes
retro_ggor_1494, retro_ggor_2344, retro_ggor_933,
Macaca mulatta ENSMMUG00000015996 possible_ortholog 1 retrogene
retro_mmul_10,
Monodelphis domestica ENSMODG00000019554 ortholog_one2many 2 retrogenes
retro_mdom_151, retro_mdom_733,
Mus musculus ENSMUSG00000032966 ortholog_one2one 1 retrogene
retro_mmus_1293,
Procavia capensis ENSPCAG00000011316 other_paralog 2 retrogenes
retro_pcap_454, retro_pcap_78,
Rattus norvegicus ENSRNOG00000008822 ortholog_one2one 1 retrogene
retro_rnor_453,
Sus scrofa ENSSSCG00000007188 ortholog_one2one 1 retrogene
retro_sscr_98,
Tursiops truncatus ENSTTRG00000003547 ortholog_one2one 3 retrogenes
retro_ttru_1227, retro_ttru_802, retro_ttru_904,
Vicugna pacos ENSVPAG00000011511 ortholog_one2one 1 retrogene
retro_vpac_171,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_37 50.85 79.31
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2. retro_pcap_289 58.06 84.14
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Download FASTA sequences of all ENSPCAG00000008816 retrocopies