Parental gene:

FKBP1A, ENSGGOG00000001729

Aliases:None
Description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:G3RU72]
Organism:Gorilla (Gorilla gorilla)
Coordinates:20:1384573..1409967(-)


>ENSGGOG00000001729
GTGCGCAGGCGACGCGCCGAGGGACTAGGCAGAGCCGTGGAAACGCCGCCAGGTCGCTGTTGGTCCACGCCGCCCGTCGC
GCTGCCCGCCCGCTCAGCGTCCGCCGCCGCCATGGGAGTGCAGGTGGAAACCATCTCCCCAGGAGACGGGCGCACCTTCC
CCAAGCGCGGCCAGACCTGCGTGGTGCACTACACCGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCCCGGGACAGA
AACAAGCCCTTTAAGTTTATGCTAGGCAAGCAGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAGATGAGTGTGGG
TCAGAGAGCCAAACTGACTATATCTCCAGATTATGCCTATGGTGCCACTGGACACCCAGGCATCATCCCACCACATGCCA
CTCTCGTCTTCGATGTGGAGCTTCTAAAACTGGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 117 .73 RPM
SRP007412_cerebellum 31 .68 RPM
SRP007412_heart 32 .08 RPM
SRP007412_kidney 65 .22 RPM
SRP007412_liver 41 .15 RPM
SRP007412_testis 46 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008303 ortholog_many2many 4 retrogenes
retro_btau_1220, retro_btau_1265, retro_btau_128, retro_btau_1760,
Callithrix jacchus ENSCJAG00000020908 ortholog_one2many 4 retrogenes
retro_cjac_1544, retro_cjac_3889, retro_cjac_4157, retro_cjac_537,
Ciona savignyi ENSCSAVG00000006859 ortholog_many2many 1 retrogene
retro_csav_11,
Dasypus novemcinctus ENSDNOG00000005868 possible_ortholog 16 retrogenes
retro_dnov_1289, retro_dnov_1577, retro_dnov_1666, retro_dnov_2236, retro_dnov_228, retro_dnov_2404, retro_dnov_2418, retro_dnov_2544, retro_dnov_2589, retro_dnov_263, retro_dnov_584, retro_dnov_621, retro_dnov_670, retro_dnov_684, retro_dnov_707, retro_dnov_937,
Echinops telfairi ENSETEG00000007454 possible_ortholog 1 retrogene
retro_etel_2059,
Felis catus ENSFCAG00000026097 possible_ortholog 2 retrogenes
retro_fcat_168, retro_fcat_751,
Homo sapiens ENSG00000088832 ortholog_one2one 1 retrogene
retro_hsap_1198,
Gorilla gorilla ENSGGOG00000010471 within_species_paralog 4 retrogenes
retro_ggor_2120, retro_ggor_2852, retro_ggor_2854, retro_ggor_2855,
Macaca mulatta ENSMMUG00000015996 ortholog_one2many 1 retrogene
retro_mmul_10,
Monodelphis domestica ENSMODG00000019554 ortholog_many2many 2 retrogenes
retro_mdom_151, retro_mdom_733,
Mustela putorius furo ENSMPUG00000017946 possible_ortholog 1 retrogene
retro_mputfur_1649,
Mus musculus ENSMUSG00000032966 possible_ortholog 1 retrogene
retro_mmus_1293,
Nomascus leucogenys ENSNLEG00000009356 ortholog_one2one 5 retrogenes
retro_nleu_2009, retro_nleu_2628, retro_nleu_2728, retro_nleu_2730, retro_nleu_604,
Otolemur garnettii ENSOGAG00000002629 ortholog_one2many 1 retrogene
retro_ogar_673,
Procavia capensis ENSPCAG00000008816 possible_ortholog 2 retrogenes
retro_pcap_289, retro_pcap_37,
Pongo abelii ENSPPYG00000010852 ortholog_one2one 5 retrogenes
retro_pabe_1654, retro_pabe_1686, retro_pabe_2364, retro_pabe_2365, retro_pabe_998,
Pan troglodytes ENSPTRG00000013163 ortholog_one2one 2 retrogenes
retro_ptro_2983, retro_ptro_818,
Pteropus vampyrus ENSPVAG00000013840 possible_ortholog 1 retrogene
retro_pvam_1367,
Rattus norvegicus ENSRNOG00000008822 possible_ortholog 1 retrogene
retro_rnor_453,
Sus scrofa ENSSSCG00000007188 ortholog_one2many 1 retrogene
retro_sscr_98,
Tursiops truncatus ENSTTRG00000003547 ortholog_one2many 3 retrogenes
retro_ttru_1227, retro_ttru_802, retro_ttru_904,
Vicugna pacos ENSVPAG00000011511 ortholog_one2many 1 retrogene
retro_vpac_171,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_933 76.67 82.76
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2. retro_ggor_1494 85.19 55.86
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3. retro_ggor_2344 90.21 98.62
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Download FASTA sequences of all ENSGGOG00000001729 retrocopies