Parental gene:

DDX21, ENSPPYG00000002389

Aliases:None
Description:DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:HGNC Symbol;Acc:2744]
Organism:Orangutan (Pongo abelii)
Coordinates:10:66519369..66549264(-)


>ENSPPYG00000002389
ATGCCGGGAAAACTCCGTAGTGACGCTGGTTTGGAATCAGACACCGCAATGAAAAAAGGGGAGACACTGCGAAAGCAAAC
GGAGAAGAAAGAGAAAAAAGAGAAGCCAAAATCTGATAAGACTGAAGAGATAGCAGAAGAGGAAGAAACTGTTTTCCCCA
AAGCTAAACAAGTTAAAAAGAAAGCAGAGCCTTCTGAAGTTGACATGAATTCTCCTAAATCCAAAAAGGCAAAAAAGAAA
GAGGAGCCATCTCAAAATGACATTTCTCCTAAAACCAAAAGTTTGAGAAAGAAAAAGGAGCCCATTGAAAAAAAAGTGGT
TTCTTCTAAAACCAAAAAAGTGACAAAAAATGAGGAGCCTTTTGAGGAAGAAATAGATGCTCCTAAGCCCAAGAAGATGA
AGAAAGAAAAGGAAATGAATGGAGAAACTGGAGAGAAAAGCCCCAAACTGAAGAATGGATTTCCTCATCCTGAATCTGAC
TATAACCCCAGTGAAGCTGCCAGTGAAGAAAGTAACAGTGAGATAGAGCAGGAAATACCTGTGGAACAAAAAGAAGGCGC
TTTCTCTAATTTTCCCATATCTGAAGAAACTATTAAACTTCTCAAAGGCCGAGGAGTGACCTTCCTATTTCCTATACAAG
CAAAGACATTCCATCATGTTTACAGCGGGAAGGACTTAATTGCACAGGCGCGGACAGGAACTGGGAAGACATTCTCCTTT
GCCATCCCTTTGATTGAGAAACTTCATGGGGAACTGCAAGACAGGAAGAGAGGCCGTCCCCCTCAGGTACTGGTTCTTGC
ACCTACAAGAGAGTTGGCAAATCAAGTAAGCAAAGACTTCAGTGACATCACAAAAAAGCTGTCAGTGGCTTGTTTTTATG
GTGGAACTCCCTATGGAGGTCAATTTGAACGCATGAGGAATGGGATTGATATCCTGGTTGGAACACCAGGTCGTATCAAA
GACCACATACAGAATGGCAAACTAGATCTCACCAAACTTAAGCATGTTGTCCTGGATGAAGTGGACCAGATGTTGGATAT
GGGATTTGCTGATCAAGTGGAAGAGATTTTAAGTGTGGCGTACAAGAAAGATTCTGAAGACAATCCCCAAACATTGCTTT
TTTCTGCAACTTGCCCTCATTGGGTATTTAATGTTGCCAAGAAATACATGAAATCTACATATGAACAGGTGGACCTGATT
GGTAAAAAGACTCAGAAAACGGCAATAACTGTGGAGCATCTGGCTATTAAGTGCCACTGGACTCAGAGGGCAGCAGTTAT
TGGGGATGTCATCCGAGTATACAGTGGTCATCAAGGACGCACTATCATCTTTTGTGAAACCAAGAAAGAAGCCCAGGAGC
TGTCCCAGAATTCAGCTATAAAGCAGGATGCTCAGTCCTTGCATGGAGACATTCCACAGAAGCAAAGGGAAATCACCCTG
AAAGGTTTTAGAAATGGTAGTTTTGGAGTTTTGGTGGCAACCAATGTTGCTGCACGTGGGTTAGACATCCCTGAGGTTGA
TTTGGTTATACAAAGCTCTCCACCAAAGGATGTAGAGTCCTACATTCATCGATCCGGGCGGACAGGCAGAGCTGGAAGGA
CGGGGGTGTGCATCTGCTTTTATCAGCACAAGGAAGAGTATCAATTAGTACAAGTGGAGCAAAAAGCGGGAATTAAGTTC
AAACGAATAGGTGTTCCTTCTGCAACAGAAATAATAAAAGCTTCCAGCAAAGATGCCATCAGGCTTTTGGATTCCGTGCC
TCCCACTGCCATTAGTCACTTCAAACAATCAGCTGAGAAGCTGATAGAGGAGAAGGGAGCTGTGGAAGCTCTGGCAGCAG
CACTGGCCCATATTTCAGGTGCCACGTCCGTAGACCAGCGCTCCTTGATCAACTCAAATGTGGGTTTTGTGACCATGATC
TTGCAGTGCTCAATTGAAATGCCAAATATTAGTTATGCTTGGAAAGAACTTAAAGAGCAACTGGGCGAGGAGATTGATTC
CAAAGTGAAGGGAATGGTTTTTCTCAAAGGAAAGCTGGGTGTTTGCTTTGATGTACCTACCGCATCAGTAACAGAAATAC
AGGAGAAATGGCATGATTCACGACGCTGGCAGCTCTCTGTGGCCACAGAGCAACCAGAGCTGGAAGGACCACGGGAAGGA
TATGGAGGCTTCAGGGGACAGCGGGAAGGCAGTCGAGGCTTCAGGGGACAGCGGGACGGAAACAGAAGATTCAGAGGACA
GCGGGAAGGCAGTAGAGGCCCAAGAGGACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATCCCAAAACAAAGGCCAGA
AGCGGAGTTTCAGTAAAGCATTTGGTCAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .68 RPM
SRP007412_cerebellum 23 .35 RPM
SRP007412_heart 32 .45 RPM
SRP007412_kidney 32 .12 RPM
SRP007412_liver 29 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013791 ortholog_one2one 2 retrogenes
retro_cfam_1024, retro_cfam_1925,
Callithrix jacchus ENSCJAG00000012876 ortholog_one2one 1 retrogene
retro_cjac_1912,
Macropus eugenii ENSMEUG00000010586 ortholog_one2one 1 retrogene
retro_meug_1383,
Microcebus murinus ENSMICG00000015112 ortholog_one2one 1 retrogene
retro_mmur_95,
Mus musculus ENSMUSG00000020075 ortholog_one2one 2 retrogenes
retro_mmus_582, retro_mmus_662,
Procavia capensis ENSPCAG00000016697 ortholog_one2one 1 retrogene
retro_pcap_346,
Pongo abelii ENSPPYG00000002390 within_species_paralog 3 retrogenes
retro_pabe_2007, retro_pabe_2369, retro_pabe_2418,
Pongo abelii ENSPPYG00000016774 within_species_paralog 1 retrogene
retro_pabe_39,
Tupaia belangeri ENSTBEG00000002310 ortholog_one2one 2 retrogenes
retro_tbel_1590, retro_tbel_4454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3816 86.54 54.53
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000002389 retrocopies