Parental gene:

DKFZP459B0431, ENSPPYG00000016782

Aliases:TMEM30A, CDC50A
Description:Cell cycle control protein 50A [Source:UniProtKB/Swiss-Prot;Acc:Q5R6C0]
Organism:Orangutan (Pongo abelii)
Coordinates:6:75846708..75878382(-)


>ENSPPYG00000016782
ATGTTCAGGGTGCGTCCGCTTTTTCGTTCCCGCTTCTTTCCTCCTCCCCTTTCCCCTCCCCATGTCCCTCCTTCTTCTCC
CTCCTCCCTCTCTCCCTCCCTCTGGCGTCTCCAGCCTACTTTCGCTTCCCGTCAGCGGCCTTTGGCGGAAGAGTGTCCCG
CCTCTTCCGCTCTACAGCGGAGGTGGCTGTGGCGGCGGCGGCGGCGGCAGCGGCGATCGAGAGGTTCCTGTCAGGGTCAG
CCGGCGGGCCCCCTGGGTGGTCCACCTGCAAGTCGCGGAGCGGCGCCCCGGGGATCGATGGCGATGAACTATAACGCGAA
GGATGAAGTGGACGGTGGGCCCCCGTGTGCTCCGGGGGGCAGCGCGAAGACTCGGAGACCGGATAACACGGCCTTCAAAC
AGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGGCACGGTGCTACCTATTTTCTTCATCATCGGCCTCATCTTC
ATTCCCATTGGCATTGGCATCTTTGTCACCTCCAACAACATCCGCGAGATCGAGATTGATTATACCGGAACAGAGCCTTC
CAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCATTTGTACCATTAACTTCACACTGGAAAAGTCTTTTG
AGGGCAATGTGTTTATGTATTATGGACTGTCTAATTTCTATCAAAATCATCGTCGTTACGTGAAATCTCGAGATGATAGT
CAGCTAAATGGAGATTCTAGTGCTTTGCTTAATCCCAGTAAGGAATGTGAGCCTTATCGAAGAAATGAGGACAAACCAAT
TGCTCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGATACATTAGAATTGTTTCTCATTGGCAATGATTCTTATCCTA
TACCTATCGCTTTGAAAAAGAAAGGTATTGCTTGGTGGACAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAGGAGAC
AACCTGAAAGAACGATTTAAAGGTACAACAAAGCCTGTGAACTGGCTTAAACCAGTTTACATGCTGGATTCTGACCCAGA
TAATAATGGATTCATAAATGAGGATTTTATTGTTTGGATGCGTACTGCAGCATTACCTACTTTTCGCAAGTTGTATCGTC
TTATAGAAAGGAAAAGTGATTTACATCCAACATTACCAGCTGGACGATACTCTTTGAATGTCACATACAATTACCCTGTA
CATTATTTTGATGGACGAAAACGGATGATCTTGAGCACTATTTCATGGATGGGAGGAAAAAATCCATTTTTGGGGATTGC
TTACATCGCTGTTGGATCCATCTCCTTCCTTCTGGGAGTTGTACTGCTAGTAATTAATCATAAATATAGAAACAGTAGTA
ATACAGCTGACATTACCATTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 170 .57 RPM
SRP007412_cerebellum 174 .50 RPM
SRP007412_heart 42 .78 RPM
SRP007412_kidney 86 .68 RPM
SRP007412_liver 64 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005100 ortholog_one2one 1 retrogene
retro_btau_72,
Canis familiaris ENSCAFG00000002708 ortholog_one2one 1 retrogene
retro_cfam_26,
Callithrix jacchus ENSCJAG00000010325 ortholog_one2one 1 retrogene
retro_cjac_801,
Cavia porcellus ENSCPOG00000020712 ortholog_one2many 1 retrogene
retro_cpor_23,
Homo sapiens ENSG00000112697 ortholog_one2one 1 retrogene
retro_hsap_12,
Myotis lucifugus ENSMLUG00000011923 ortholog_one2one 1 retrogene
retro_mluc_1871,
Monodelphis domestica ENSMODG00000018502 ortholog_one2one 1 retrogene
retro_mdom_287,
Mus musculus ENSMUSG00000032328 ortholog_one2one 1 retrogene
retro_mmus_108,
Nomascus leucogenys ENSNLEG00000004962 ortholog_one2one 1 retrogene
retro_nleu_69,
Otolemur garnettii ENSOGAG00000015718 ortholog_one2one 1 retrogene
retro_ogar_22,
Pelodiscus sinensis ENSPSIG00000007174 ortholog_one2one 1 retrogene
retro_psin_61,
Rattus norvegicus ENSRNOG00000010895 ortholog_one2one 1 retrogene
retro_rnor_399,
Ictidomys tridecemlineatus ENSSTOG00000002543 ortholog_one2one 1 retrogene
retro_itri_50,
Tarsius syrichta ENSTSYG00000008211 ortholog_one2one 1 retrogene
retro_tsyr_928,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_204 55.43 55.43
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Download FASTA sequences of all ENSPPYG00000016782 retrocopies