Parental gene:

Tmem30a, ENSRNOG00000010895

Aliases:None
Description:Cell cycle control protein 50A [Source:UniProtKB/Swiss-Prot;Acc:Q6AY41]
Organism:Rat (Rattus norvegicus)
Coordinates:8:86767827..86789807(-)


>ENSRNOG00000010895
ATGGCGATGAACTATAGCGCGAAGGATGAGGTGGACGGCGGGCCCACGGGTCCTCCGGGGGGCGCCGCCAAGACCCGGAG
GCCGGATAACACGGCCTTCAAACAGCAACGGTTGCCTGCCTGGCAGCCCATCCTCACCGCCGGCACGGTGCTGCCCACCT
TCTTCATCATCGGCCTCATCTTCATTCCCATCGGCATCGGCATCTTCGTCACCTCCAACAACATCCGTGAGATCGAGGGC
AATGTGTTTATGTATTATGGACTGTCTAATTTCTATCAAAACCATCGTCGTTATGTGAAATCCCGAGATGATAGCCAGTT
AAACGGAGACCCTAGTGCTTTGCTTAATCCAAGTAAGGAATGTGAACCCTATCGAAGAAATGAAGACAAACCGATTGCTC
CATGTGGGGCCATTGCCAACAGCATGTTTAACGATACGTTAGAGTTGTTTCTGGTTGCCAATGAATCTGATCCCAAGCCT
GTGCCAATTCTTTTGAAGAAAAAAGGTATTGCTTGGTGGACAGATAAAAATGTGAAATTCAGAAATCCACCTGGAAAAGA
CAGCCTTCAAGAAAAGTTTAAAGATACAACAAAGCCAGTAAACTGGCATAAACCAGTATATGAGCTAGACCCTGATGATG
AAAGTAATAATGGATTCATAAATGAAGACTTTATTGTTTGGATGCGTACTGCAGCTTTACCTACTTTTCGTAAGTTATAT
CGTCTTATAGAGCGGACAGATGATTTACACCCAACACTACCAGCTGGACAGTACTATTTGAACATCACATACAATTACCC
TGTACATTTTTTTGATGGACGAAAACGGATGATCTTGAGCACTATTTCATGGATGGGAGGAAAGAATCCATTTTTGGGAA
TTGCTTACATCACTATTGGATCCATCTCCTTCCTTCTGGGAGTTGTACTGCTAGTAATTAATCATAAATATAGAAACAGT
AGTAATACTGCTGACATCACCATTTAA

Library Parental gene expression (RPM)
SRP017611_brain 138 .33 RPM
SRP017611_kidney 101 .11 RPM
SRP017611_liver 95 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005100 ortholog_one2one 1 retrogene
retro_btau_72,
Canis familiaris ENSCAFG00000002708 ortholog_one2one 1 retrogene
retro_cfam_26,
Callithrix jacchus ENSCJAG00000010325 ortholog_one2one 1 retrogene
retro_cjac_801,
Cavia porcellus ENSCPOG00000020712 ortholog_one2many 1 retrogene
retro_cpor_23,
Homo sapiens ENSG00000112697 ortholog_one2one 1 retrogene
retro_hsap_12,
Myotis lucifugus ENSMLUG00000011923 ortholog_one2one 1 retrogene
retro_mluc_1871,
Monodelphis domestica ENSMODG00000018502 ortholog_one2one 1 retrogene
retro_mdom_287,
Mus musculus ENSMUSG00000032328 ortholog_one2one 1 retrogene
retro_mmus_108,
Nomascus leucogenys ENSNLEG00000004962 ortholog_one2one 1 retrogene
retro_nleu_69,
Otolemur garnettii ENSOGAG00000015718 ortholog_one2one 1 retrogene
retro_ogar_22,
Pongo abelii ENSPPYG00000016782 ortholog_one2one 1 retrogene
retro_pabe_204,
Pelodiscus sinensis ENSPSIG00000007174 ortholog_one2one 1 retrogene
retro_psin_61,
Ictidomys tridecemlineatus ENSSTOG00000002543 ortholog_one2one 1 retrogene
retro_itri_50,
Tarsius syrichta ENSTSYG00000008211 ortholog_one2one 1 retrogene
retro_tsyr_928,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_399 58.37 74.09
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Download FASTA sequences of all ENSRNOG00000010895 retrocopies