Parental gene:

RALA, ENSPPYG00000017619

Aliases:None
Description:v-ral simian leukemia viral oncogene homolog A (ras related) [Source:HGNC Symbol;Acc:9839]
Organism:Orangutan (Pongo abelii)
Coordinates:7:44347231..44437101(-)


>ENSPPYG00000017619
ATGGCCGCAAATAAGCCCAAGGGTCAGAATTCTTTGGCCTTACACAAAGTCATCATGGTGGGCAGTGGTGGCGTGGGCAA
GTCAGCTCTGACTCTACAGTTCATGTACGATGAGTTTGTGGAGGACTATGAGCCTACCAAAGCAGACAGCTATCGGAAGA
AGGTAGTGCTAGATGGGGAGGAAGTACAGATCGATATCTTAGATACAGCTGGGCAGGAGGACTACGCTGCAATTAGAGAC
AACTACTTCCGAAGCGGGGAGGGGTTCCTCTGTGTTTTCTCTATTACAGAAATGGAATCCTTTGCAGCTACAGCTGACTT
CAGGGAGCAGATTTTAAGAGTAAAAGAAGATGAGAATGTTCCATTTCTACTGGTTGGTAACAAATCAGATTTAGAAGATA
AAAGGCAGGTTTCTGTAGAAGAGGCAAAAAACAGAGCTGAGCAGTGGAATGTTAACTACGTGGAAACATCTGCTAAAACA
CGAGCTAATGTTGACAAGGTATTTTTTGATTTAATGAGAGAAATTCGAGCGAGAAAGATGGAAGACAGCAAAGAAAAGAA
TGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .20 RPM
SRP007412_cerebellum 12 .16 RPM
SRP007412_heart 9 .30 RPM
SRP007412_kidney 12 .60 RPM
SRP007412_liver 11 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007630 ortholog_one2one 1 retrogene
retro_cjac_3313,
Dasypus novemcinctus ENSDNOG00000017413 ortholog_one2one 1 retrogene
retro_dnov_573,
Homo sapiens ENSG00000006451 ortholog_one2one 2 retrogenes
retro_hsap_1136, retro_hsap_3707,
Macropus eugenii ENSMEUG00000000259 ortholog_one2one 1 retrogene
retro_meug_1638,
Macaca mulatta ENSMMUG00000016059 ortholog_one2one 2 retrogenes
retro_mmul_1706, retro_mmul_882,
Nomascus leucogenys ENSNLEG00000003055 ortholog_one2one 1 retrogene
retro_nleu_935,
Pongo abelii ENSPPYG00000001028 other_paralog 1 retrogene
retro_pabe_1132,
Pongo abelii ENSPPYG00000004369 within_species_paralog 1 retrogene
retro_pabe_2870,
Pongo abelii ENSPPYG00000004751 other_paralog 1 retrogene
retro_pabe_3403,
Pan troglodytes ENSPTRG00000019108 ortholog_one2one 1 retrogene
retro_ptro_2511,
Sus scrofa ENSSSCG00000029741 ortholog_one2one 1 retrogene
retro_sscr_634,
Ictidomys tridecemlineatus ENSSTOG00000020292 ortholog_one2one 2 retrogenes
retro_itri_1314, retro_itri_1315,
Vicugna pacos ENSVPAG00000002810 ortholog_one2one 1 retrogene
retro_vpac_211,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_945 87.50 84.95
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2. retro_pabe_3148 85.71 57.28
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3. retro_pabe_3208 85.71 57.28
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Download FASTA sequences of all ENSPPYG00000017619 retrocopies