Parental gene:

RALA, ENSPTRG00000019108

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:42477681..42560955(-)


>ENSPTRG00000019108
ATGGCTGCAAATAAGCCCAAGGGTCAGAATTCTTTGGCTTTACACAAAGTCATCATGGTGGGCAGTGGTGGCGTGGGCAA
GTCAGCTCTGACTCTACAGTTCATGTACGATGAGTTTGTGGAGGACTACGAGCCTACCAAAGCAGACAGCTATCGGAAGA
AGGTAGTGCTAGATGGGGAGGAAGTCCAGATCGACATCTTAGATACAGCTGGGCAGGAGGACTACGCTGCAATTAGAGAC
AACTACTTCCGAAGTGGGGAGGGGTTCCTCTGTGTTTTCTCTATTACAGAAATGGAATCCTTTGCAGCTACAGCTGACTT
CAGGGAGCAGATTTTAAGAGTAAAAGAAGATGAGAATGTTCCATTTCTACTGGTTGGTAACAAATCAGATTTAGAAGATA
AAAGACAGGTTTCTGTAGAAGAGGCAAAAAACAGAGCTGAGCAGTGGAATGTTAACTACGTGGAAACATCTGCTAAAACA
CGAGCTAATGTTGACAAGGTATTTTTTGATTTAATGAGAGAAATTCGAGCGAGAAAGATGGAAGACAGCAAAGAAAAGAA
TGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 33 .01 RPM
SRP007412_cerebellum 25 .56 RPM
SRP007412_heart 18 .86 RPM
SRP007412_kidney 27 .01 RPM
SRP007412_liver 23 .57 RPM
SRP007412_testis 24 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007630 ortholog_one2one 1 retrogene
retro_cjac_3313,
Dasypus novemcinctus ENSDNOG00000017413 ortholog_one2one 1 retrogene
retro_dnov_573,
Homo sapiens ENSG00000006451 ortholog_one2one 2 retrogenes
retro_hsap_1136, retro_hsap_3707,
Macropus eugenii ENSMEUG00000000259 ortholog_one2one 1 retrogene
retro_meug_1638,
Macaca mulatta ENSMMUG00000016059 ortholog_one2one 2 retrogenes
retro_mmul_1706, retro_mmul_882,
Nomascus leucogenys ENSNLEG00000003055 ortholog_one2one 1 retrogene
retro_nleu_935,
Pongo abelii ENSPPYG00000017619 ortholog_one2one 3 retrogenes
retro_pabe_3148, retro_pabe_3208, retro_pabe_945,
Pan troglodytes ENSPTRG00000001102 other_paralog 1 retrogene
retro_ptro_937,
Pan troglodytes ENSPTRG00000005197 other_paralog 3 retrogenes
retro_ptro_1812, retro_ptro_2383, retro_ptro_2877,
Sus scrofa ENSSSCG00000029741 ortholog_one2one 1 retrogene
retro_sscr_634,
Ictidomys tridecemlineatus ENSSTOG00000020292 ortholog_one2one 2 retrogenes
retro_itri_1314, retro_itri_1315,
Vicugna pacos ENSVPAG00000002810 ortholog_one2one 1 retrogene
retro_vpac_211,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2511 82.35 57.28
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Download FASTA sequences of all ENSPTRG00000019108 retrocopies