Parental gene:

HSPA5, ENSPPYG00000019609

Aliases:HSPA5, GRP78
Description:78 kDa glucose-regulated protein precursor [Source:RefSeq peptide;Acc:NP_001126927]
Organism:Orangutan (Pongo abelii)
Coordinates:9:122119136..122124229(-)


>ENSPPYG00000019609
ATGAAGCTCTCCCTGGTGGCCGCGATGCTGCTGCTGCTCAGCGCGGCGCGGGCCGAGGAGGAGGACAAGAAGGAGGACGT
GGGTACCGTGGTCGGCATCGACCTGGGGACCACCTACTCCTGCGTCGGCGTGTTCAAGAACGGCCGCGTGGAGATCATCG
CCAACGATCAGGGCAACCGCATCACGCCGTCCTATGTGGCCTTCACTCCTGAAGGGGAACGTCTGATCGGCGATGCCGCC
AAGAACCAGCTCACCTCCAACCCCGAAAACACGGTCTTTGACGCCAAGCGGCTCATCGGCCGCACGTGGAATGACCCGTC
TGTGCAGCAGGACATCAAGTTCTTGCCGTTCAAGGTGGTTGAAAAGAAAACTAAACCATACATTCAAGTTGACATTGGAG
GTGGGCAAACAAAGACATTTGCTCCTGAAGAAATTTCTGCCATGGTTCTCACTAAAATGAAAGAAACCGCTGAGGCTTAT
TTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAACGCCAAGCAACCAAAGACGC
TGGAACTATTGCTGGCCTAAATGTTATGAGGATCATCAACGAGCCTACGGCAGCTGCTATTGCTTATGGACTGGATAAGA
GGGAGGGGGAGAAGAACATCCTGGTGTTTGACCTGGGTGGCGGAACCTTCGATGTGTCTCTTCTCACCATTGACAATGGT
GTCTTCGAAGTCGTGGCCACTAATGGAGATACTCATCTGGGTGGAGAAGACTTTGACCAGCGTGTCATGGAACACTTCAT
CAAACTGTACAAAAAGAAGACTGGCAAAGATGTCAGGAAAGACAACAGAGCTGTGCAGAAACTCCGGCGCGAGGTAGAAA
AGGCCAAACGGGCCCTGTCTTCTCAACATCAAGCAAGAATTGAAATTGAGTCCTTCTATGAAGGAGAAGACTTTTCTGAG
ACCCTGACTCGGGCCAAATTTGAAGAGCTCAACATGGATCTGTTCCGGTCTACTATGAAGCCCGTCCAGAAAGTGTTGGA
AGATTCTGATTTGAAGAAGTCTGATATTGATGAAATTGTTCTTGTTGGTGGCTCGACTCGAATTCCAAAGATTCAGCAAC
TGGTTAAAGAGTTCTTCAATGGCAAGGAACCATCCCGCGGCATAAACCCAGATGAAGCTGTAGCGTATGGTGCTGCTGTC
CAGGCTGGTGTGCTCTCTGGTGATCAAGATACAGGTGACCTGGTACTGCTTGATGTATGTCCCCTTACACTTGGTATTGA
AACTGTGGGAGGTGTCATGACCAAACTGATTCCAAGGAACACAGTGGTGCCTACCAAGAAGTCTCAGATCTTTTCTACAG
CTTCTGATAATCAACCAACTGTTACAATCAAGGTCTATGAAGGTGAACGACCCCTGACAAAAGACAATCATCTTCTGGGT
ACATTTGATCTGACTGGAATTCCTCCTGCTCCTCGTGGGGTCCCACAGATTGAAGTCACCTTTGAGATAGATGTGAATGG
TATTCTTCGAGTGACAGCTGAAGACAAGGGTACAGGGAACAAAAATAAGATCACAATTACCAATGACCAGAATCGCCTGA
CACCTGAAGAAATCGAAAGGATGGTTAATGATGCTGAGAAGTTTGCTGAGGAAGACAAAAAGCTCAAGGAGCGCATTGAT
ACTAGAAATGAGTTGGAAAGCTATGCATATTCTCTAAAGAATCAGATTGGAGATAAAGAAAAGCTGGGAGGTAAACTTTC
CTCTGAAGATAAGGAGACCATGGAAAAAGCTGTAGAAGAAAAGATTGAATGGCTGGAAAGCCACCAAGATGCTGACATTG
AAGACTTCAAAGCTAAGAAGAAGGAACTGGAAGAAATTGTTCAACCAATTATCAGCAAACTCTATGGAAGTGCAGGCCCT
CCCCCAACTGGTGAAGAGGATACAGCAGAAAAAGATGAGTTGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 193 .90 RPM
SRP007412_cerebellum 166 .47 RPM
SRP007412_heart 309 .67 RPM
SRP007412_kidney 512 .98 RPM
SRP007412_liver 1997 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006880 ortholog_one2one 1 retrogene
retro_cjac_2221,
Homo sapiens ENSG00000044574 ortholog_one2one 1 retrogene
retro_hsap_3005,
Gallus gallus ENSGALG00000001000 ortholog_one2one 1 retrogene
retro_ggal_21,
Gorilla gorilla ENSGGOG00000026879 ortholog_one2one 1 retrogene
retro_ggor_2082,
Macropus eugenii ENSMEUG00000016702 ortholog_one2one 1 retrogene
retro_meug_522,
Mus musculus ENSMUSG00000026864 ortholog_one2one 1 retrogene
retro_mmus_1299,
Nomascus leucogenys ENSNLEG00000017348 ortholog_one2one 1 retrogene
retro_nleu_751,
Otolemur garnettii ENSOGAG00000006786 ortholog_one2one 1 retrogene
retro_ogar_2901,
Pongo abelii ENSPPYG00000003987 within_species_paralog 9 retrogenes
retro_pabe_183, retro_pabe_2193, retro_pabe_2254, retro_pabe_2260, retro_pabe_2261, retro_pabe_3153, retro_pabe_355, retro_pabe_3804, retro_pabe_3808,
Pan troglodytes ENSPTRG00000000563 ortholog_one2one 1 retrogene
retro_ptro_2033,
Ictidomys tridecemlineatus ENSSTOG00000011243 ortholog_one2one 4 retrogenes
retro_itri_1686, retro_itri_1687, retro_itri_1689, retro_itri_1879,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2491 80.62 63.46
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Download FASTA sequences of all ENSPPYG00000019609 retrocopies