Parental gene:

RNF128, ENSPTRG00000022151

Aliases:None
Description:ring finger protein 128, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:21153]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:107142235..107244388(+)


>ENSPTRG00000022151
AGTAATACTAAGAAGCCCTGGATTGCGCTGATAGAAAGAGGTAATTGTACATTTTCAGAAAAAATTCAAATGGCTTATGA
GAGAGGGGCGTCTGGAGCCGTCATCTTTAACTTCCCCGGGACCCGCAATGAGGTCATCCCCATGTCTCACCCGGGTGCAG
TAGACATTGTTGCAATCATGATCGGCAATCTGAAAGGCACAAAAATTCTGCAATCTATTCAAAGAGGCATACAAGTGACA
ATGGTCATAGAAGTAGGGAAAAAACATGGCCCTTGGGTGAATCACTATTCAATTTTTTTCGTTTCTGTGTCCTTTTTTAT
TATTACGGCGGCAACTGTGGGCTATTTTATCTTTTATTCTGCTCGAAGGCTACGGAATGCAAGAGCTCAAAGCAGGAAGC
AGAGGCAATTAAAGGCAGATGCTAAAAAAGCTATTGGAAGGCTTCAACTACGCACACTGAAACAAGGAGACAAGGAAATT
GGCCCTGATGGAGATAGTTGTGCTGTGTGCATTGAATTGTATAAACCAAATGATTTGGTACGCATCTTAACGTGCAACCA
TATTTTCCATAAGACATGTGTTGACCCATGGCTGTTAGAACACAGGACTTGCCCCATGTGCAAATGTGACATACTCAAAG
CTTTGGGAATTGAGGTGGATGTTGAAGATGGATCAGTGTCTTTACAAGTCCCTGTATCCAATGAAATATCTAATAGTGCC
TCCTCCCATGAAGAGGATAATCGCAGCGAGACCGCATCATCTGGATATGCTTCAGTACAGGGAACAGATGAACCGCCTCT
GGAGGAACACGTGCAGTCAACAAATGAAAATCTACAGCTGGTAAACCATGAAGCAAATTCTGTGGCAGTGGATGTTATTC
CTCATGTTGACAACCCAACCTTTGAAGAAGACGAAACTCCTAATCAAGAGACTGCTGTTCGAGAAATTAAATCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .75 RPM
SRP007412_cerebellum 1 .83 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 17 .23 RPM
SRP007412_liver 25 .40 RPM
SRP007412_testis 0 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000022920 ortholog_one2one 1 retrogene
retro_btau_1358,
Loxodonta africana ENSLAFG00000002816 ortholog_one2one 1 retrogene
retro_lafr_946,
Macropus eugenii ENSMEUG00000001567 ortholog_one2one 1 retrogene
retro_meug_1139,
Mustela putorius furo ENSMPUG00000003695 ortholog_one2one 1 retrogene
retro_mputfur_340,
Oryctolagus cuniculus ENSOCUG00000012328 ortholog_one2one 1 retrogene
retro_ocun_37,
Sus scrofa ENSSSCG00000012551 ortholog_one2one 1 retrogene
retro_sscr_597,
Ictidomys tridecemlineatus ENSSTOG00000022922 ortholog_one2one 2 retrogenes
retro_itri_1254, retro_itri_1255,
Tursiops truncatus ENSTTRG00000007536 ortholog_one2one 1 retrogene
retro_ttru_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2651 52.16 80.19
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Download FASTA sequences of all ENSPTRG00000022151 retrocopies