Parental gene:

ENSPTRG00000041941

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2A:69086528..69163200(-)


>ENSPTRG00000041941
ATGCAACCTCAGTGTCCACTGAGAAGGGAATCTTGTGGTATGGAACTATGTGGCAAAAAGGGAAATGAGGCAAGTTATCC
TTTGGAAATGTGCTCACACTTTGATGCGGATGAAATTAAAAGGCTAGGAAAGAGATTTAAGAAGCTTGATTTGGACAATT
CTGGTTCTTTGAGTGTGGAAGAGTTCATGTCTCTGCCTGAGTTACAACAGAATCCTTTAGTACAGCGAGTAATAGATATA
TTCGACACAGATGGGAATGGAGAAGTAGACTTTAAAGAATTCATTGAGGGCGTCTCTCAGTTCAGTGTCAAAGGAGATAA
GGAGCAGAAATTGAGGTTTGCTTTCCGTATCTATGACATGGATAAAGATGGCTATATTTCCAATGGGGAACTCTTCCAGG
TATTGAAGATGATGGTGGGGAACAATCTGAAAGATACACAGTTACAGCAAATTGTAGACAAAACCATAATAAATGCAGAT
AAGGATGGAGATGGAAGAATATCCTTTGAAGAATTCTGTGCTGTTGTAGGTGGCCTAGATATCCACAAAAAGATGGTGGT
AGATGTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 85 .89 RPM
SRP007412_cerebellum 78 .22 RPM
SRP007412_heart 12 .30 RPM
SRP007412_kidney 10 .75 RPM
SRP007412_liver 13 .32 RPM
SRP007412_testis 14 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010619 ortholog_many2many 1 retrogene
retro_btau_1660,
Choloepus hoffmanni ENSCHOG00000002893 possible_ortholog 1 retrogene
retro_chof_2602,
Callithrix jacchus ENSCJAG00000006498 ortholog_one2many 1 retrogene
retro_cjac_624,
Dipodomys ordii ENSDORG00000019760 ortholog_one2many 1 retrogene
retro_dord_404,
Equus caballus ENSECAG00000009627 possible_ortholog 1 retrogene
retro_ecab_651,
Felis catus ENSFCAG00000028482 ortholog_many2many 1 retrogene
retro_fcat_1639,
Homo sapiens ENSG00000221823 ortholog_many2many 1 retrogene
retro_hsap_3,
Loxodonta africana ENSLAFG00000022682 ortholog_many2many 1 retrogene
retro_lafr_1014,
Macaca mulatta ENSMMUG00000017460 ortholog_one2many 1 retrogene
retro_mmul_1141,
Mustela putorius furo ENSMPUG00000006250 ortholog_many2many 1 retrogene
retro_mputfur_537,
Nomascus leucogenys ENSNLEG00000026538 ortholog_many2many 1 retrogene
retro_nleu_1049,
Oryctolagus cuniculus ENSOCUG00000027562 possible_ortholog 1 retrogene
retro_ocun_272,
Otolemur garnettii ENSOGAG00000034876 ortholog_many2many 1 retrogene
retro_ogar_1011,
Pan troglodytes ENSPTRG00000006942 within_species_paralog 2 retrogenes
retro_ptro_2144, retro_ptro_2407,
Rattus norvegicus ENSRNOG00000043210 ortholog_many2many 1 retrogene
retro_rnor_1932,
Sus scrofa ENSSSCG00000022362 possible_ortholog 1 retrogene
retro_sscr_86,
Ictidomys tridecemlineatus ENSSTOG00000025985 ortholog_many2many 1 retrogene
retro_itri_1569,
Tarsius syrichta ENSTSYG00000019531 possible_ortholog 2 retrogenes
retro_tsyr_326, retro_tsyr_41,
Tursiops truncatus ENSTTRG00000021395 ortholog_many2many 1 retrogene
retro_ttru_382,
Vicugna pacos ENSVPAG00000015522 possible_ortholog 1 retrogene
retro_vpac_3,
Drosophila melanogaster FBgn0015614 ortholog_many2many 1 retrogene
retro_dmel_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2909 79.35 97.35
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Download FASTA sequences of all ENSPTRG00000041941 retrocopies