Parental gene:

RPL28, ENSPVAG00000007315

Aliases:None
Description:ribosomal protein L28 [Source:HGNC Symbol;Acc:10330]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_2523:213190..214986(+)


>ENSPVAG00000007315
ATGTCCGCCCATCTGCAATGGATGGTCGTACGGAACTGCTCCAGTTTCCTGATAAAGAGAAACAAGCAGACGTACAGCAC
CGAACCCAATAATCTGAAGGCCCGCAATTCCTTCCGCTACAACGGGCTGATTCACCGCAAGACGGTGGGCGTGGAGCCGG
CAGCGGATGGCAAAGGCGTGATGATCGTCATGAAGCGGAGATCCGGCCAGCGAAAGCCAGCCACCTACGTGCGGACCACC
ATCAACAAGAATGCCCGGGCCACCCTCAGCAGCATCCGACACATGATCCGCAAAAACAAGTACCGCCCTGATCTGCGCAT
GGCCGCCATCCGCAGAGCCAGCGCCATCCTGCGCAGCCAGAAGCCCGTGATGGTGAAGAGGAAGCGGGCCCGCCCCACTA
AGAGCTCCTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015980 ortholog_one2many 1 retrogene
retro_acar_10,
Ailuropoda melanoleuca ENSAMEG00000003764 ortholog_one2one 15 retrogenes
retro_amel_1006, retro_amel_1099, retro_amel_1155, retro_amel_1369, retro_amel_1393, retro_amel_1465, retro_amel_1737, retro_amel_231, retro_amel_289, retro_amel_33, retro_amel_474, retro_amel_556, retro_amel_630, retro_amel_822, retro_amel_829,
Callithrix jacchus ENSCJAG00000000869 possible_ortholog 1 retrogene
retro_cjac_218,
Cavia porcellus ENSCPOG00000012833 possible_ortholog 2 retrogenes
retro_cpor_127, retro_cpor_214,
Felis catus ENSFCAG00000005639 ortholog_one2one 15 retrogenes
retro_fcat_1045, retro_fcat_1214, retro_fcat_1397, retro_fcat_1404, retro_fcat_1463, retro_fcat_1629, retro_fcat_1663, retro_fcat_171, retro_fcat_233, retro_fcat_484, retro_fcat_575, retro_fcat_786, retro_fcat_904, retro_fcat_910, retro_fcat_942,
Macropus eugenii ENSMEUG00000015744 ortholog_one2one 1 retrogene
retro_meug_1497,
Myotis lucifugus ENSMLUG00000023789 ortholog_one2many 1 retrogene
retro_mluc_325,
Macaca mulatta ENSMMUG00000015901 possible_ortholog 1 retrogene
retro_mmul_68,
Monodelphis domestica ENSMODG00000000275 ortholog_one2one 1 retrogene
retro_mdom_1458,
Mustela putorius furo ENSMPUG00000007450 ortholog_one2one 10 retrogenes
retro_mputfur_1014, retro_mputfur_1050, retro_mputfur_1426, retro_mputfur_470, retro_mputfur_639, retro_mputfur_763, retro_mputfur_804, retro_mputfur_855, retro_mputfur_909, retro_mputfur_951,
Mus musculus ENSMUSG00000030432 possible_ortholog 10 retrogenes
retro_mmus_162, retro_mmus_1679, retro_mmus_1911, retro_mmus_2511, retro_mmus_2526, retro_mmus_2606, retro_mmus_2629, retro_mmus_3149, retro_mmus_362, retro_mmus_738,
Petromyzon marinus ENSPMAG00000008617 ortholog_one2one 1 retrogene
retro_pmar_10,
Pongo abelii ENSPPYG00000010417 possible_ortholog 4 retrogenes
retro_pabe_1691, retro_pabe_1869, retro_pabe_2383, retro_pabe_2778,
Rattus norvegicus ENSRNOG00000017127 possible_ortholog 5 retrogenes
retro_rnor_1588, retro_rnor_2117, retro_rnor_243, retro_rnor_610, retro_rnor_855,
Sorex araneus ENSSARG00000009741 ortholog_one2one 1 retrogene
retro_sara_643,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_38 70.67 54.41
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2. retro_pvam_359 80.45 94.85
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Download FASTA sequences of all ENSPVAG00000007315 retrocopies