Parental gene: | COX6B1, ENSPVAG00000012821 |
| Aliases: | None |
| Description: | cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) [Source:HGNC Symbol;Acc:2280] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_513:52622..58902(+) |
>ENSPVAG00000012821
ATCTACTCTCACTCCCAGATAGCGGGTCAAGATCTCTCCCGAGTCAGCAACATGGCAGAAGACATCAAGACCAAAATCAA
GAACTACCAGACTGCCCCTTTTGACAGCCGCTTCCCCAACCAGAACCAGACCAGGAACTGTTGGCAGAACTACCTGGACT
TCCACCGCTGTGAGAAGGCAATGACCGCTAAAGGGGGTGATGTCTCCGTATGTGAATGGTACCGGCGTGTGTACAAGTCC
CTCTGCCCCATATCCTGGGTGTCAACCTGGGATGACCGCCGGGCAGAAGGCACATTTCCTGGGAAGATCTGA
ATCTACTCTCACTCCCAGATAGCGGGTCAAGATCTCTCCCGAGTCAGCAACATGGCAGAAGACATCAAGACCAAAATCAA
GAACTACCAGACTGCCCCTTTTGACAGCCGCTTCCCCAACCAGAACCAGACCAGGAACTGTTGGCAGAACTACCTGGACT
TCCACCGCTGTGAGAAGGCAATGACCGCTAAAGGGGGTGATGTCTCCGTATGTGAATGGTACCGGCGTGTGTACAAGTCC
CTCTGCCCCATATCCTGGGTGTCAACCTGGGATGACCGCCGGGCAGAAGGCACATTTCCTGGGAAGATCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000563 | ortholog_one2one | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000006913 | ortholog_one2many | 7 retrogenes | |
| Callithrix jacchus | ENSCJAG00000010211 | ortholog_one2many | 5 retrogenes | |
| Equus caballus | ENSECAG00000012317 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000006378 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000126267 | ortholog_one2one | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000009902 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011365 | ortholog_one2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000016765 | ortholog_one2many | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000013962 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000006258 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000036751 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011283 | ortholog_one2one | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009606 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004148 | ortholog_one2one | 4 retrogenes | |
| Oryzias latipes | ENSORLG00000006070 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010854 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000024309 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000010771 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002907 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000014563 | ortholog_one2one | 8 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002241 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_303 | 81.11 | 86.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_336 | 74.73 | 87.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pvam_576 | 73.86 | 84.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pvam_717 | 74.44 | 85.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pvam_757 | 72.73 | 63.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pvam_1031 | 85.56 | 86.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pvam_1044 | 79.73 | 71.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pvam_1331 | 74.19 | 88.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000012821 retrocopies