Parental gene:

Pfdn6, ENSRNOG00000000473

Aliases:Pfdn6, Ke2
Description:prefoldin 6 [Source:RefSeq peptide;Acc:NP_001158190]
Organism:Rat (Rattus norvegicus)
Coordinates:20:7514595..7516060(+)


>ENSRNOG00000000473
ATGGCCGAACTGATCCAAAAGAAGCTGCAGGGAGAGGTAGAGAAATATCAACAGCTGCAGAAGGACTTGAGTAAATCCAT
GTCAGGGAGGCAGAAGCTTGAAGCCCAGCTAACGGAAAATAACATTGTGAAGGAGGAACTGGCCTTGCTGGATGGATCCA
ACGTGGTCTTTAAGCTTCTGGGACCCGTGCTTGTCAAACAGGAGCTGGGGGAGGCTCGGGCCACAGTGGGGAAGAGGCTA
GACTACATCACAGCGGAAATTAAGCGCTACGAATCGCAGCTTCGGGACCTCGAAAGGCAGTCAGAGCAACAGAGGGAAAC
CCTTGCTCAGTTGCAGCAGGAGTTCCAGCGGGCCCAGAACGCAAAGGCTCCCGGGAAAGCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 11 .56 RPM
SRP017611_kidney 21 .98 RPM
SRP017611_brain 33 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001576 ortholog_one2one 2 retrogenes
retro_amel_221, retro_amel_824,
Bos taurus ENSBTAG00000010723 ortholog_one2one 1 retrogene
retro_btau_619,
Cavia porcellus ENSCPOG00000019520 ortholog_one2one 1 retrogene
retro_cpor_570,
Dipodomys ordii ENSDORG00000013828 ortholog_one2one 1 retrogene
retro_dord_453,
Macropus eugenii ENSMEUG00000016778 ortholog_one2one 1 retrogene
retro_meug_1930,
Microcebus murinus ENSMICG00000000922 ortholog_one2one 1 retrogene
retro_mmur_1520,
Mus musculus ENSMUSG00000024309 ortholog_one2one 1 retrogene
retro_mmus_1930,
Oryctolagus cuniculus ENSOCUG00000010559 ortholog_one2one 1 retrogene
retro_ocun_711,
Otolemur garnettii ENSOGAG00000028341 possible_ortholog 4 retrogenes
retro_ogar_1185, retro_ogar_2023, retro_ogar_3508, retro_ogar_85,
Ochotona princeps ENSOPRG00000000983 possible_ortholog 1 retrogene
retro_opri_12,
Sorex araneus ENSSARG00000006330 ortholog_one2one 2 retrogenes
retro_sara_338, retro_sara_453,
Tupaia belangeri ENSTBEG00000013280 ortholog_one2one 1 retrogene
retro_tbel_454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2216 94.59 86.61
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2. retro_rnor_2869 60.16 96.06
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Download FASTA sequences of all ENSRNOG00000000473 retrocopies